Sequence of DPV Cocksfoot mottle virus
Cocksfoot mottle virus RNA representing defective interfering RNA type 1
ACC No: AJ243470
Dated: 2000-01-07 | Length: 983 | CRC: -1839802784
!!NA_SEQUENCE 1.0 ID CMO243470 standard; RNA; VRL; 983 BP. XX AC AJ243470; XX SV AJ243470.1 XX DT 07-JAN-2000 (Rel. 62, Created) DT 07-JAN-2000 (Rel. 62, Last updated, Version 1) XX DE Cocksfoot mottle virus RNA representing defective interfering RNA type 1 XX KW coat protein; cp gene; defective interfering rna. XX OS cocksfoot mottle virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus. XX RN [1] RP 1-983 RA Makinen K.M.; RT ; RL Submitted (17-JUN-1999) to the EMBL/GenBank/DDBJ databases. RL Makinen K.M., Institute of Biotechnology, University of Helsinki, P.O.Box RL 56, Viikinkaari9, FIN-00014 University of Helsinki, FINLAND. XX RN [2] RA Makinen K., Generozov E., Arshava N., Kaloshin A., MOrozov S.Y., RA Zavriev S.; RT "Characterization of defective interfering-like RNAs in cocksfoot mottle RT sobemovirus."; RL Unpublished. XX DR SPTREMBL; Q9PWT2; Q9PWT2. XX FH Key Location/Qualifiers FH FT source 1. .983 FT /country="Russia" FT /db_xref="taxon:40979" FT /note="DI-RNA type 1" FT /virion FT /organism="cocksfoot mottle virus" FT /isolate="Russian" FT /specific_host="Dactylis glomerata" FT /lab_host="Avena sativa, Hordeum vulgare" FT 5'UTR 1. .91 FT CDS 92. .757 FT /db_xref="SPTREMBL:Q9PWT2" FT /note="putative truncated coat protein" FT /gene="CP" FT /protein_id="CAB64891.1" FT /translation="MEPVSRPLNPPAAVGSTLKAGRGKTAGVSDWFDTGMITSYLGGFQ FT RTAGTTDSQVFIVSPAALDRVGTIAKAYALWRPKHWEIVYLPRCSTQTDGSIEMGFLLD FT YADSVPTNTRTMASSTSFTTSNVWGGGDGSSLLHTSMKSMGNAVTSALPCDEFSNKWFK FT LSWSTPEESENAHLTDTYVPARFVVRSDFPVVTADQPGHLWLRSRILLKGSVSPSTNL" FT 3'UTR 758. .983 XX SQ Sequence 983 BP; 212 A; 257 C; 270 G; 244 T; 0 other; AJ243470 Length: 983 December 21, 2001 15:38 Type: N Check: 6788 .. 1 ataatagtgc gaagaaagac acactgttat cgttccaaaa cccagagctc 51 agcagcagcc tgggggccgc cgcaggaggc gtggccggtc gatggagcca 101 gtctctcgac ctttgaaccc tccagcggcg gttggttcca ccttgaaggc 151 tggtagaggc aagactgctg gtgtgagtga ctggtttgat accggtatga 201 tcaccagcta tctgggcggt ttccagcgca cagctgggac cactgactcc 251 caagttttca ttgtgtcacc cgctgctttg gaccgtgttg gaaccatagc 301 caaggcgtat gcgttgtgga gacctaagca ttgggaaatc gtgtatctcc 351 ccagatgttc tactcagaca gatgggtcga ttgaaatggg atttctctta 401 gattatgcgg atagcgtccc aaccaacacc cgaactatgg cctcctctac 451 ctccttcaca acttcaaacg tgtggggagg tggggatggc agcagcttgc 501 tgcacacgtc catgaagtcc atgggcaacg ctgttacgag tgctcttccc 551 tgtgacgagt tctcgaacaa gtggtttaag ttatcttgga gcactcctga 601 ggaatcggag aacgctcatt tgactgacac ctatgttccg gcgcgcttcg 651 tggtgaggtc tgacttcccg gtagtcacgg ctgaccaacc tggtcatctt 701 tggcttcggt ccaggatctt gctcaaggga tcggtttccc cttctacaaa 751 tctgtagtta agtaccgcag ggatggcaaa cctgtataac agtgcccgcg 801 cttggtggag tcgcgtttgt ccacttggaa atctaactcc aaagctttgc 851 ttgaagattg acggattggt atcatctccg taaggatacc gaccactggc 901 tgggctcgtc acccctcctt tgtgtctcac aaacgacgaa tctgcgctcg 951 gcaaatgaca ggatcatggc cggggcaggt gct