Sequence of DPV Potato virus Y

Potato virus Y partial P1 gene for proteinase, strain PVY-O

ACC No: AJ245556

Dated: 2000-07-15 | Length: 828 | CRC: -1945809068

                !!NA_SEQUENCE 1.0
ID   PVI245556  standard; genomic RNA; VRL; 828 BP.
XX
AC   AJ245556;
XX
SV   AJ245556.1
XX
DT   15-JUL-2000 (Rel. 64, Created)
DT   15-JUL-2000 (Rel. 64, Last updated, Version 1)
XX
DE   Potato virus Y partial P1 gene for proteinase, strain PVY-O
XX
KW   P1 gene; proteinase.
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-828
RA   Maki-Valkama T.K.;
RT   ;
RL   Submitted (30-JUL-1999) to the EMBL/GenBank/DDBJ databases.
RL   Maki-Valkama T.K., Plant biology/Plant pathology, Helsinki University, P.O.
RL   BOX 28, FIN-00014 Helsinki, FINLAND.
XX
RN   [3]
RX   PUBMED; 10755299.
RA   Maki-Valkama T.K., Valkonen J.P.T., Kreuze J.F., Pehu E.;
RT   "Transgenic resistance to PVY(0) associated with post-transcriptional
RT   silencing of P1 transgene is overcome by PVY(N) strains that carry highly
RT   homologous P1 sequences and recover transgene expression at infection";
RL   Mol. Plant Microbe Interact. 13(4):366-373(2000).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .828
FT                   /country="Finland:Viikki"
FT                   /db_xref="taxon:12216"
FT                   /mol_type="genomic RNA"
FT                   /organism="Potato virus Y"
FT                   /strain="O"
FT                   /isolate="Viikki"
FT   CDS             1. .>828
FT                   /db_xref="GOA:Q9ICU8"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q9ICU8"
FT                   /note="lacks 24 nucleotides from the 3'end"
FT                   /gene="P1"
FT                   /product="P1 protein"
FT                   /function="proteinase"
FT                   /protein_id="CAB97514.1"
FT                   /translation="MATYMSTICFGSFECKLPYSPASCGHIAKEREVLASVDPFADLET
FT                   QLSARLLKQEYATVRVLKNGTLTYRYKTDAQITRIQKKLERKDREEYHFQMAAPSIVSK
FT                   ITIAGGDPPSKSEPQAPRGIIHTTPRVRKVKTHPIIKLTEGQMDHLIKQVKQIMSEKRG
FT                   SVHLISKKTTHVQYKEILGATRAAVRTAHMMGLRRRVDFRCDMWTVGLLQRLARTDKWS
FT                   NQVRTINIRKGDSGVILNTKSLKGHFGRSSGDLFIVRGSHEGKLYDARSRVTQS"
XX
SQ   Sequence 828 BP; 252 A; 174 C; 203 G; 199 T; 0 other;

AJ245556  Length: 828  December 20, 2005 16:48  Type: N  Check: 5930  ..

       1  atggcaactt acatgtcaac aatttgtttc ggttcgtttg aatgcaagct
      51  accatactca cccgcctctt gcgggcatat tgcgaaggaa cgagaagtgc
     101  tggcttccgt tgatcctttt gcagatctgg aaacacaact tagtgcacga
     151  ttgctcaagc aagaatatgc tactgttcgt gtgctcaaga acggtactct
     201  tacgtaccga tacaagactg atgcccagat aacgcgcatc cagaagaaac
     251  tggaaaggaa ggatagggaa gaatatcact tccagatggc agctcctagt
     301  attgtgtcaa aaattactat agctggtgga gatcctccat caaagtctga
     351  gccacaagca ccaagaggta tcattcatac aactccaagg gtgcgtaaag
     401  tcaagacaca ccccataata aagttgacag aaggccagat ggatcatctc
     451  attaagcagg tgaagcagat tatgtcggag aagagagggt ctgttcactt
     501  aattagtaag aagaccactc atgttcaata taaggagata cttggtgcaa
     551  ctcgcgcagc ggttcgaact gcacatatga tgggcttgcg acggagagtg
     601  gacttccgat gtgatatgtg gacagttgga cttttgcaac gtctcgctcg
     651  gacggacaaa tggtccaatc aagtccgcac tatcaacata cgaaagggtg
     701  atagtggagt catcttgaac acaaaaagtc tcaaaggcca ctttggtaga
     751  agttcaggag acttgttcat agtgcgtgga tcacacgaag ggaaattgta
     801  cgatgcacgt tctagagtta ctcagagt