Sequence of DPV Infectious salmon anemia virus
Infectious salmon anemia virus ORF for hypothetical protein, genomic RNA, isolate 390/98
ACC No: AJ277461
Dated: 2003-07-01 | Length: 1508 | CRC: -1101788206
!!NA_SEQUENCE 1.0
ID ISA277461 standard; genomic RNA; VRL; 1508 BP.
XX
AC AJ277461;
XX
SV AJ277461.2
XX
DT 06-JAN-2003 (Rel. 74, Created)
DT 01-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE Infectious salmon anemia virus ORF for hypothetical protein, genomic RNA,
DE isolate 390/98
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KW ORF.
XX
OS Infectious salmon anemia virus
OC Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
OC unclassified Orthomyxoviridae.
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RN [1]
RC revised by [3]
RA Snow M.;
RT ;
RL Submitted (26-APR-2000) to the EMBL/GenBank/DDBJ databases.
RL Snow M., Aquaculture and Animal Health, FRS Marine Laboratory, PO Box 101
RL Victoria Road, AB11 9DB, UNITED KINGDOM.
XX
RN [2]
RA Snow M., Cunningham C.O.;
RT "Nucleotide sequence of an mRNA coding for Segment 5 hypothetical protein
RT of infectious salmon anemia virus (ISAV)";
RL Unpublished.
XX
RN [3]
RP 1-1508
RA Snow M.;
RT ;
RL Submitted (01-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL Snow M., Aquaculture and Animal Health, FRS Marine Laboratory, PO Box 101
RL Victoria Road, AB11 9DB, UNITED KINGDOM.
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FH Key Location/Qualifiers
FH
FT source 1. .1508
FT /country="United Kingdom:Scotland"
FT /db_xref="taxon:55987"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Infectious salmon anemia virus"
FT /isolate="390/98"
FT /specific_host="Salmo salar"
FT CDS 29. .1363
FT /db_xref="UniProt/TrEMBL:Q8AZ50"
FT /note="ORF"
FT /product="hypothetical protein"
FT /protein_id="CAC81828.1"
FT /translation="MAFLTILVLFLLKEVLCEPCTCDNPTCLGLTIPRTGYVRSAPGGV
FT LLTETITESPALAEWTTSRSRLEDSTWQGGEVKSGKVSQTLFEAIQGTQMENCAVKAVF
FT DTSFVNLTRHDVVLGRVKVSPFGGEHDISKCGRKGLKVFICGGTTGYVTRGCPPEECRG
FT RKGRMMSLEPTADCGVEKGFTTERIKTGKVDLDSCCTQHGCTKGIRVEVPSPVLVSAKC
FT NEISFRVVPFHSVPDRLGFARTSSFTLRANLANQHGWSKYSFNLRAFPGEEFIKCCGFT
FT LGIGGAWFQAYLNGEVQGDGAASAEDVKEKLNGIIDQINKVNLLLEGEIEAVRRIAYMN
FT QASSLQNQVEIGLIGEYLNISSWLETKTLTKTEEGLMKDGWCRSSNHCWCPPDTVGIPT
FT IGYVDNIKEVTGTSWWMVMIHYIIVGLIVVVLVVLGLKLWGCIRR"
XX
SQ Sequence 1508 BP; 448 A; 254 C; 406 G; 400 T; 0 other;
AJ277461 Length: 1508 October 13, 2004 17:42 Type: N Check: 4501 ..
1 acgcggggac accaaacaaa agttaaagat ggcttttcta acaattttag
51 tcttgttcct tttgaaagag gttctttgtg agccttgtac ctgtgacaac
101 ccaacatgtc taggtttaac aattcctagg actggttatg ttaggagtgc
151 tcctggaggt gtactattga cagagaccat cacggaaagc cctgctctgg
201 cagaatggac cacttcccga agcagacttg aggattcaac gtggcaggga
251 ggagaggtca aaagtggcaa agtctcgcag acgttgtttg aagcaatcca
301 gggcacccag atggagaact gtgcagtgaa ggctgtattt gatacttcct
351 ttgtgaatct cactcgacat gatgttgtcc ttggtagggt gaaggtgtct
401 ccttttggtg gtgagcatga catctccaaa tgtgggagga aaggattaaa
451 agttttcatc tgcggaggta caacaggtta tgtaaccaga ggatgtccac
501 cggaggaatg cagggggagg aaaggaagga tgatgtctct agaaccaact
551 gcagactgtg gagtggaaaa aggctttaca acggaaagaa ttaagactgg
601 aaaggtggac ttggatagct gttgcactca gcatggatgt acaaaaggga
651 ttagggtgga ggttccatcg cctgtactgg tatcggccaa atgcaatgaa
701 atttcgttca gagtagtgcc gttccattct gtaccagaca ggctagggtt
751 cgctagaact agttctttta cactaagagc caacctcgct aaccagcatg
801 gatggtctaa atacagcttc aacctgagag cattcccagg agaagagttc
851 atcaaatgct gtggatttac tttggggatc ggaggtgctt ggtttcaagc
901 ttatttgaat ggagaagtcc aaggagacgg tgcagcatcc gcagaagatg
951 tgaaggaaaa actgaacgga attatagacc agatcaacaa ggtgaacctg
1001 ctgctagaag gagaaattga agcagtgaga agaattgcct acatgaacca
1051 agcctcaagt ctgcagaacc aagtggagat tggactgata ggggaatatc
1101 tgaacattag cagctggttg gaaaccaaaa cattgacgaa gacagaggag
1151 ggtcttatga aggacggttg gtgccggtct agcaatcatt gctggtgtcc
1201 tcctgatact gttggaatcc ctactatagg ttatgtcgac aatattaagg
1251 aagtgacagg gacgagttgg tggatggtga tgattcatta cattatcgtt
1301 ggactgattg tagttgtgtt ggtagtgctg ggacttaagc tgtggggatg
1351 cattaggaga taaattgtct ttctgctggt ttttctctgt acataactta
1401 tattttgttt gcaaggattt tgtatgtatc aggaccttta ttggataatt
1451 tagaaatctg tatttgatta tgcattatta aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaa