Sequence of DPV Potato virus A
Potato virus A partial genomic mRNA for potyviral polypeptide, isolate Sab
ACC No: AJ277992
Dated: 2005-04-15 | Length: 1183 | CRC: -566649369
!!NA_SEQUENCE 1.0
ID PVI277992 standard; mRNA; VRL; 1183 BP.
XX
AC AJ277992;
XX
SV AJ277992.1
XX
DT 01-AUG-2000 (Rel. 64, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE Potato virus A partial genomic mRNA for potyviral polypeptide, isolate Sab
XX
KW 6K2 protein; CI protein; NIa-Pro protein; potyviral gene; VPg protein.
XX
OS Potato virus A
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1183
RA Rajamaki M.;
RT ;
RL Submitted (16-MAY-2000) to the EMBL/GenBank/DDBJ databases.
RL Rajamaki M., Dept. of Plant Biology, Swedish University of Agricultural
RL Sciences (SLU), P. O. Box 7080, S-750 07 Uppsala, SWEDEN.
XX
RN [2]
RA Rajamaki M.L., Kekarainen T., Oruetxebarria I., Valkonen J.P.T.;
RT "Directional control of phloem loading and unloading by the viral
RT genome-linked protein";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1183
FT /country="Finland"
FT /db_xref="taxon:12215"
FT /mol_type="mRNA"
FT /organism="Potato virus A"
FT /isolate="Sab"
FT CDS <1. .>1183
FT /codon_start=2
FT /db_xref="GOA:Q9ICS4"
FT /db_xref="HSSP:1LVB"
FT /db_xref="InterPro:IPR001730"
FT /db_xref="UniProt/TrEMBL:Q9ICS4"
FT /gene="potyviral"
FT /product="potyviral polypeptide"
FT /protein_id="CAC01251.1"
FT /translation="GIGRMTSAQASKVAYTLETDIHSIQRTILIIDQLLEREMQKQSHF
FT EMVTNQSCSSGMLSLQTMMNAIQSRYAKNHTAGNIEILQRAKAQLLEFSNLSGDISTES
FT ALREFGYLEAVQFQSGTQVSNFLGLEGHWKKSLITKDLLIVGGVCVGAAWMIGEYFFKK
FT SKEVVAFQGYNKRQRQKLKFARARDEKMGHYVEAPDSTLEHYFGSAYTKKGKTKGKTHG
FT MGKKNRRFVNMYGFDPSDYTFIRYVDPLTGYTLDESPYTDIRLIQSQFSDIREQQLLND
FT ELERNMVYHRPGVQGYLVKDKTSQILKIDLTPHIPLKVCDTTNNIAGHPDREGELRQTG
FT KGQLLDYAELPQKKELVEFESTSMFRGVRDYNPISSVICQLENESEGRTTQLFG"
FT mat_peptide <1. .355
FT /gene="potyviral"
FT /product="CI"
FT mat_peptide 356. .514
FT /gene="potyviral"
FT /product="6K2"
FT mat_peptide 515. .1081
FT /gene="potyviral"
FT /product="VPg"
FT mat_peptide 1082. .>1183
FT /gene="potyviral"
FT /product="NIa"
XX
SQ Sequence 1183 BP; 393 A; 216 C; 290 G; 284 T; 0 other;
AJ277992 Length: 1183 April 19, 2005 08:49 Type: N Check: 1263 ..
1 tggtattggt cgtatgacaa gtgcgcaagc aagcaaagta gcgtacactc
51 ttgagactga tatacactct atccaaagaa caattctcat cattgatcaa
101 ctgttggaaa gagagatgca aaagcagagc cacttcgaaa tggtcacaaa
151 ccaatcttgt agtagtggta tgttgtctct gcaaacaatg atgaatgcca
201 tccaatctcg atatgccaag aatcacacag caggaaatat tgagatcttg
251 cagagagcga aagctcaatt attagaattc tcaaatctca gtggggacat
301 atcaactgag tcagcattgc gtgaatttgg gtacttagag gcagtgcagt
351 tccagtctgg aacacaagtg tcaaacttcc taggattaga aggacactgg
401 aagaagtccc taatcacaaa ggacttgttg atagttgggg gagtgtgtgt
451 gggtgcagcg tggatgatcg gtgaatattt ctttaagaag tcgaaggaag
501 tggtggcatt tcagggctac aataagcgac agaggcaaaa actgaagttt
551 gccagggcca gagatgagaa gatgggccat tatgtagaag caccggattc
601 cacgttagag cactattttg gaagcgcgta cacaaagaaa ggaaaaacaa
651 agggcaaaac ccatggaatg gggaaaaaga accgcaggtt cgtgaatatg
701 tatggttttg atccaagtga ctatacattc attcgctatg ttgatccttt
751 aactggctac acactagatg agagtcccta tactgatatc aggctaatcc
801 agagccagtt tagtgatatt cgtgaacagc agttactaaa cgatgagctg
851 gaaaggaata tggtgtacca caggccaggt gtccaagggt atttagtgaa
901 ggataaaacc tcacaaatac tcaaaataga tttaactcca cacataccat
951 tgaaggtctg cgacaccaca aataacatag ctggccatcc agatagagaa
1001 ggggaattga ggcaaactgg taaggggcag ctacttgact atgctgaact
1051 accacagaag aaagagttgg ttgaattcga gtcgacatct atgtttagag
1101 gggtgcgcga ttataatcct atatctagtg ttatttgtca actcgaaaat
1151 gaatcagaag gacgaacaac acagctcttt gga