Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus CP gene for coat protein, isolate Tz1 genomic RNA

ACC No: AJ279938

Dated: 2000-09-30 | Length: 720 | CRC: 885595444

                !!NA_SEQUENCE 1.0
ID   RYE279938  standard; RNA; VRL; 720 BP.
XX
AC   AJ279938;
XX
SV   AJ279938.1
XX
DT   30-SEP-2000 (Rel. 65, Created)
DT   30-SEP-2000 (Rel. 65, Last updated, Version 1)
XX
DE   Rice yellow mottle virus CP gene for coat protein, isolate Tz1 genomic RNA
XX
KW   coat protein; cp gene.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (20-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., LPRC, CIRAD/IRD, BP 5045, 34032 Montpellier cedex 1, FRANCE.
XX
RN   [3]
RA   Pinel A., N'Guessan P., Bousalem M., Fargette D.;
RT   "Molecular variability of geographically distinct isolates of Rice yellow
RT   mottle virus in Africa";
RL   Arch. Virol. 145:1621-1638(2000).
XX
DR   SPTREMBL; Q9DUP3; Q9DUP3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /country="Tanzania"
FT                   /db_xref="taxon:31744"
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Tz1"
FT   CDS             1. .720
FT                   /db_xref="SPTREMBL:Q9DUP3"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAC10442.1"
FT                   /translation="MARKGKKISSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   TVPGPLSSSSWPVHSVEFLMDFKRSATSAEATAFNCVPFNLPRVWSLARCYSLWKPTRW
FT                   DVIYLPEVSAATAGSIEMCYLYDYADAIPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   TARNAVVASMDCSRVGWRRVTSSIPSSVDPNVVNTILPARLAVRSSIKPTVDDVPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 152 A; 192 C; 218 G; 158 T; 0 other;

AJ279938  Length: 720  December 21, 2001 15:39  Type: N  Check: 9794  ..

       1  atggccagga agggcaagaa aatcagctcc aaccagggcc agcaaggaaa
      51  gaagaagagt cggcgtcccc gtgggcgttc ggcggagccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggacggt tcctggtcca
     151  ctatcttcta gctcctggcc ggtccactcc gtggaattcc taatggattt
     201  taagcggagt gccacatcgg cagaagcgac ggcattcaac tgtgtgccgt
     251  ttaatctgcc tcgggtgtgg agtcttgcgc gttgttactc actgtggaag
     301  ccaacacggt gggacgtcat ctacctccct gaggttagtg cggcgacagc
     351  tggaagtatc gagatgtgct atctctacga ctatgctgat gccattccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctctagcgtt
     451  tggtacggcg ctgagggctg ccacttgttg agtggcggca cagcacggaa
     501  tgccgtggtc gcctcgatgg attgctctcg agtcggctgg agacgcgtta
     551  ctagttcaat acctagtagc gtggatccca acgtcgtaaa caccatactg
     601  ccagcaaggc tagctgtgcg gtcgtcgatc aaaccgacgg ttgatgatgt
     651  gccggggaaa ctctatgcca tcgtcagtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga