Sequence of DPV Kalanchoe latent virus
Kalanchoe latent virus gene for RNA replicase (partial), ORF2, ORF3, ORF4, gene for coat protein and ORF6 (partial), genomic RNA, isolate PV-0290
ACC No: AJ293571
Dated: 2001-07-18 | Length: 2746 | CRC: 1638768219
!!NA_SEQUENCE 1.0
ID KLA293571 standard; RNA; VRL; 2746 BP.
XX
AC AJ293571;
XX
SV AJ293571.1
XX
DT 15-JUL-2000 (Rel. 64, Created)
DT 18-JUL-2001 (Rel. 68, Last updated, Version 3)
XX
DE Kalanchoe latent virus gene for RNA replicase (partial), ORF2, ORF3, ORF4,
DE gene for coat protein and ORF6 (partial), genomic RNA, isolate PV-0290
XX
KW ORF1; ORF2; ORF3; ORF4; ORF5; ORF6; RNA replicase.
XX
OS Kalanchoe latent virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Carlavirus.
XX
RN [1]
RP 1-2746
RA Nicolaisen M.;
RT ;
RL Submitted (13-JUL-2000) to the EMBL/GenBank/DDBJ databases.
RL Nicolaisen M., Plant Protection, Danish Institute of Agricultural Sciences,
RL Forsoegsvej 1, Slagelse, 4200, DENMARK.
XX
RN [3]
RA Nicolaisen M., Nielsen S.L.;
RT "Analysis of the triple gene block and coat protein sequences of two
RT strains of Kalanchoe Latent Carlavirus";
RL Virus Genes 22:265-270(2001).
XX
DR SPTREMBL; Q9ICW2; Q9ICW2.
DR SPTREMBL; Q9ICW3; Q9ICW3.
DR SPTREMBL; Q9ICW4; Q9ICW4.
DR SPTREMBL; Q9ICW5; Q9ICW5.
DR SPTREMBL; Q9ICW6; Q9ICW6.
DR SPTREMBL; Q9ICW7; Q9ICW7.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2746
FT /db_xref="taxon:132477"
FT /note="carlavirus"
FT /virion
FT /organism="Kalanchoe latent virus"
FT /isolate="PV-0290"
FT CDS <1. .378
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9ICW7"
FT /note="ORF1"
FT /transl_table=1
FT /product="RNA replicase"
FT /protein_id="CAB97502.1"
FT /translation="MCSNTRLHVSSKHEGFLKKLKLKAKVAHTVNPTFCGWNLCSDGIF
FT KKPQLVFERLCIAKETNNLVNCIDNYAIEVAYAYQMGEKAVARMNEEEVDAFYNCVRVI
FT IKNKHLLKSDVRLIYESGKIQ"
FT CDS 405. .1091
FT /db_xref="SPTREMBL:Q9ICW6"
FT /note="ORF2"
FT /transl_table=1
FT /product="hypothetical protein, 25K"
FT /protein_id="CAB97503.1"
FT /translation="MDVLVNYLSKYKFVRLSSCITPPIVVHSVPGAGKSSLIRDLINSD
FT CRFSAFTFGKEDSQSITGVRISKATKELEAREFCIFDEYLEGDLPPWAFAAFADPLQGG
FT SGKVLRAHFIKEESHRFGKCTAQLLRELKFSVTASGEDVVQIRGLYEVDPQDTIIYYER
FT EVGELLRAHCVEAYSICEIRGQTFDSVTFVTANSKPIDRELSFQCLTRHRRSLLILSPD
FT ASYTAC"
FT CDS 1069. .1389
FT /db_xref="SPTREMBL:Q9ICW5"
FT /note="ORF3"
FT /transl_table=1
FT /product="hypothetical protein, 12K"
FT /protein_id="CAB97504.1"
FT /translation="MPLTPPVNYSQVYVAAVIGAAVAITLGLISRSTLPNVGDLQHNLP
FT HGGRYRDGTKVVEYFKPGKLNSFESRNSFKSQPWLLVVLLIALIIGLSRRTNACPTCGR
FT QH"
FT CDS 1371. .1565
FT /db_xref="SPTREMBL:Q9ICW4"
FT /note="ORF4"
FT /transl_table=1
FT /product="hypothetical protein, 7K"
FT /protein_id="CAB97505.1"
FT /translation="MWSSALSILILLLSYWLTSWMMGSMSSAPCTIIITGESVRITGCH
FT LSAEHIKALSHLKALQVRL"
FT CDS 1607. .2461
FT /db_xref="SPTREMBL:Q9ICW3"
FT /note="ORF5"
FT /transl_table=1
FT /product="coat protein"
FT /protein_id="CAB97506.1"
FT /translation="MAPKPDPEVAGSTSQLGTNQAAVVGTVGPSREKMLEDRLTNLIET
FT LNKDMHNSNLKNIAFEIGRPVLEPTAQMKRNPANPYGRFSIDELFKMKIDVVSNNMATT
FT EQMAKITADITGLGVPSEQVAEVILKMVIMCASVSSSAFLDPDGSVEFSSGAVPVDSIA
FT AIMKKHAGLRKVCRLYAPIVWNSMLVRNQPPSDWQAMGFPFNARFAAFDTFDYVTNAAA
FT IQPVEGIIRRPTSEEVIAHNAHKRLALDRANRNDRLGNLETEYTGGIQGAEITRNHRNA
FT NNG"
FT CDS 2445. .>2746
FT /db_xref="SPTREMBL:Q9ICW2"
FT /note="ORF6"
FT /transl_table=1
FT /product="hypothetical protein, 11K"
FT /protein_id="CAB97507.2"
FT /translation="MQTMGETKSWKKAVIFSLYNKLPLCLCVHIMRRASSRCVGTGRST
FT YARRRRAISIGRCERCYRCYPPICNSKCDNKTCFPGISSNEKIVNFIRYGVTEVIP"
XX
SQ Sequence 2746 BP; 745 A; 596 C; 685 G; 719 T; 1 other;
AJ293571 Length: 2746 December 21, 2001 15:40 Type: N Check: 2587 ..
1 atgtgctcaa acacgagact gcatgtgagc tcgaaacatg aaggtttcct
51 caagaagttg aagctcaaag caaaggttgc tcatacagtg aatcccactt
101 tttgtgggtg gaacctttgc tcggacggta tctttaaaaa accacaactt
151 gtctttgaga gactttgcat agcgaaggag accaacaatc tggtaaattg
201 cattgataat tacgctatag aagtggcgta tgcttaccaa atgggagaga
251 aggcggttgc gcgcatgaac gaagaagagg ttgacgcatt ctataactgc
301 gtcagagtca tcattaagaa taagcatttg cttaaatctg atgtccgcct
351 tatttatgaa tcgggaaaaa ttcagtagct taggtgtttg cttayagatt
401 gtatatggat gtgcttgtga attatttgag taagtataag ttcgtacgtt
451 tgtctagctg cataactcct ccgattgttg ttcacagtgt tccaggcgcc
501 ggtaagagta gcttaattag ggatttgatc aatagcgatt gcaggttttc
551 cgccttcact ttcggtaaag aggacagcca atctattact ggtgtgcgta
601 ttagtaaagc tacaaaagag ttagaggcta gagagttctg tattttcgac
651 gagtacttgg aaggggacct acctccttgg gcttttgccg cgtttgcaga
701 ccctttgcag ggcgggagcg gcaaagtttt aagggcgcat ttcatcaagg
751 aagaatcgca tcgtttcggc aagtgcacag cgcaactcct ccgcgaactc
801 aaattttcag tcactgcaag tggtgaggat gtcgtgcaaa tacgagggtt
851 gtatgaggtt gatccccagg acacgataat ctattacgaa cgcgaggtag
901 gggaattact tagagcgcac tgcgttgaag cctacagtat ctgtgaaatt
951 cgagggcaga ctttcgatag tgtgactttc gttacagcta attcaaaacc
1001 catcgatcgt gagctcagct tccagtgcct tactaggcac agacgttctt
1051 tgctgatcct tagtcctgat gcctcttaca ccgcctgtta attactcaca
1101 agtatacgtt gcggcggtta taggtgcggc tgtcgccatt actcttggac
1151 tcatttctag aagtacgctg ccgaacgtcg gggatttaca gcataactta
1201 ccacacggcg gtagatatcg tgacgggact aaggtcgttg aatatttcaa
1251 accagggaag ttaaactctt tcgagtcacg caactcattc aaatcacaac
1301 cctggttgct cgttgtattg ctcattgcgc ttatcattgg acttagtaga
1351 aggacaaatg cctgcccaac atgtggtcgt cagcactaag catcttgatt
1401 ttattgctaa gttactggtt gacctcatgg atgatgggaa gtatgtcgtc
1451 ggctccctgc acgataatca ttacggggga gtcagtgaga attacgggct
1501 gtcatttgag cgcagaacat ataaaagctt tgagtcacct gaaggcgcta
1551 caagtgcgcc tttaggtttg caggcaggta atcgttatac tttacacctt
1601 gacattatgg caccaaaacc tgacccagag gtcgcgggtt ctacatcaca
1651 gcttggcaca aatcaggcgg cagtcgttgg aactgtcgga ccttcccgtg
1701 agaaaatgct cgaggatagg ctgaccaacc tcatagaaac gctcaacaaa
1751 gacatgcaca actccaactt gaagaatatc gcattcgaga ttgggaggcc
1801 agtcctagaa ccgactgcac agatgaagag gaaccctgca aacccatacg
1851 ggaggttctc gatcgacgag ctttttaaga tgaagatcga tgtcgtctcc
1901 aataacatgg ctaccactga acaaatggct aagatcacag cggacattac
1951 tgggctaggt gtgccatcag aacaggtcgc agaggttatc ctgaaaatgg
2001 ttatcatgtg cgctagtgtg agtagctcag catttttaga tccagacggt
2051 agtgttgagt tcagctcagg ggctgtgcct gtcgattcaa tcgcggcaat
2101 tatgaagaag catgcgggcc ttagaaaagt atgccggcta tatgcgccaa
2151 tcgtctggaa cagtatgctc gtccgtaatc aaccaccatc agactggcag
2201 gcgatgggat ttccatttaa cgcgcgcttc gcagcattcg acacatttga
2251 ctacgtcacg aacgcggcgg caatacagcc agtggagggc atcattcgaa
2301 gacccacctc tgaagaggtc attgctcaca acgcacacaa acgcttggct
2351 ctcgatcgag cgaaccgaaa tgaccgactt gggaatctgg agaccgaata
2401 cactggtggc attcaaggtg cggagataac tcgaaaccat cgaaatgcaa
2451 acaatgggtg agactaaatc ctggaagaaa gcagttatat ttagcttgta
2501 taataaatta cctttatgtt tgtgtgtgca tattatgcgg agggcctcta
2551 gccgatgtgt tggaaccgga cgttctactt atgcgagacg tcgcagggcc
2601 atttccatag gcaggtgtga gaggtgttac cgctgctatc cccctatctg
2651 caattctaag tgtgataata aaacctgctt tcccgggatt tcttctaatg
2701 aaaaaattgt caatttcatc aggtacggag taaccgaggt gatacc