Sequence of DPV Tomato spotted wilt virus
Tomato spotted wilt virus N gene for nucleocapsid protein, genomic RNA, isolate GD98
ACC No: AJ297609
Dated: 2001-06-28 | Length: 1535 | CRC: 1532146997
!!NA_SEQUENCE 1.0
ID TSP297609 standard; RNA; VRL; 1535 BP.
XX
AC AJ297609;
XX
SV AJ297609.1
XX
DT 22-AUG-2000 (Rel. 64, Created)
DT 28-JUN-2001 (Rel. 68, Last updated, Version 2)
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DE Tomato spotted wilt virus N gene for nucleocapsid protein, genomic RNA,
DE isolate GD98
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KW N gene; nucleocapsid protein.
XX
OS tomato spotted wilt virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN [1]
RP 1-1535
RA Adam G.;
RT ;
RL Submitted (18-AUG-2000) to the EMBL/GenBank/DDBJ databases.
RL Adam G., Pflanzenschutz, Institut fuer Angew. Botanik, Marseillerstr. 7,
RL 20355 Hamburg, GERMANY.
XX
RN [3]
RA Heinze C., Letschert B., Hristova D., Yankulova M., Willingmann P.,
RA Atanassov A., Adam G.;
RT "Variability of the N-protein and the intergenic region of the S RNA of
RT tomato spotted wilt tospovirus (TSWV)";
RL New Microbiol. 24:175-187(2001).
XX
DR SPTREMBL; Q9EAA7; Q9EAA7.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1535
FT /country="Bulgaria"
FT /db_xref="taxon:11613"
FT /virion
FT /organism="tomato spotted wilt virus"
FT /strain="TSWV"
FT /isolate="GD98"
FT CDS complement(608. .1384)
FT /db_xref="SPTREMBL:Q9EAA7"
FT /gene="N"
FT /product="nucleocapsid protein"
FT /protein_id="CAC04253.1"
FT /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI
FT KKMSVISCLTFLKNRQSIIKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT VVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ Sequence 1535 BP; 489 A; 262 C; 225 G; 559 T; 0 other;
AJ297609 Length: 1535 December 21, 2001 15:40 Type: N Check: 2495 ..
1 atgcttcagg atcaaaataa tcttgctgtg tccggttttt ctaattatgt
51 tatgtttatt ttctttcttt acttataatt acttctctgt tttgtcattt
101 cttttaagtt cctcttgttt aatagaaaca ataaaacaaa aaataaaata
151 aaaataaaaa tcaaaaatga aacaaaaatc aaaaaaatga aacaaaaata
201 aaaaatgaaa taaaaacaac aaaaaaatta aaaaacaaaa acctaaaaaa
251 gatcccgaaa gggacaattt tggccaaatt tgggttttgt tttgtttttg
301 tttttgtttt ttgtttttat ttttatttta tttatttatt ttatttattt
351 tttatttttt attcgcagtt tttattttat gttttttgat gtttttgtta
401 ttttgtttgt ttattaagca caacacacag aaagcaaact ttaattaaac
451 acacttattt taaatttatt aagcacaaca cacagaaagc aaactttaat
501 taaacacact tattttaaat ttaacacact aagcaagcac aagcaataaa
551 gataaagaaa gctttatata tttgtagact tttccataat ttaacttaca
601 actgctttta agcaagttct gcgagttttg cctgtttttt aaccccaaac
651 atttcataga acttgttaag agtttcactg taatgttcca tagcaatact
701 tcctttagca ttaggattgc tggagctgag tatagcagca tactcttttc
751 ctttcttcac ctgatcttca ttcatttcaa atgctttgct tttcagcaca
801 gtgcaaactt ttcctaaggc ttccttggtg tcatacttct ttgggtcaat
851 cccgaggtct ttgtattttg catcctgata tatagccaag acaacactga
901 tcatctcaaa gctatcaact gaagcaataa gaggtaagct acctcccagc
951 attatggcaa gcctcacaga ctttgcatca tcaagaggta acccataggc
1001 ttgaatcaaa gggtgggaag caatcttaga tttgatagta ttgagattct
1051 cagaattccc agtttcctct acaagcctga ccctgatcaa gctatcaagc
1101 cttctgaagg tcatgtcagt ggctccaatc ctgtctgaag ttttctttat
1151 ggtaatttta ccaaaagtaa aatcactttg tttaataacc tttattatac
1201 tctgacgatt cttcaggaat gtcagacatg aaataacgct catcttcttg
1251 atctggtcaa ggttttctag acaaaaagtc ttgaagttga atgctaccag
1301 attctgatct tcctcgaact caaggtcttt gccttgtgtc aacaaagcaa
1351 caatgctttc cttagtgagc ttaaccttag acatgatgat tatagaagtt
1401 gttatatgct ttgaccgtat gtaattcaag gtgcgaaagt gcaactctgt
1451 attccgcagt cgtttcttag ggttttaatg tgatgatttg taagactgag
1501 tgttaaggtt tgaataaaat tgacacgatt gctct