Sequence of DPV Potato virus Y

Potato virus Y partial cp gene for capsid protein, genomic RNA, isolate PN-82

ACC No: AJ303096

Dated: 2006-11-10 | Length: 804 | CRC: 673556225

                
ID   AJ303096; SV 1; linear; genomic RNA; STD; VRL; 804 BP.
XX
AC   AJ303096;
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DT   21-DEC-2000 (Rel. 66, Created)
DT   10-NOV-2006 (Rel. 89, Last updated, Version 2)
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DE   Potato virus Y partial cp gene for capsid protein, genomic RNA, isolate
DE   PN-82
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KW   capsid protein; cp gene.
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-804
RA   Ponz Ascaso F.;
RT   ;
RL   Submitted (19-DEC-2000) to the EMBL/GenBank/DDBJ databases.
RL   Ponz Ascaso F., Mejora Genetica y Biotecnologia, Instituto Nacional de
RL   Investigacion y Tecnologia Agraria y A, Autovia A-6, Km. 7.5, Madrid,
RL   28040, SPAIN.
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RN   [2]
RA   Romero A., Blanco-Urgoiti B., Soto M.J., Fereres A., Ponz F.;
RT   "Characterization of typical pepper-isolates of PVY reveals multiple
RT   pathotypes within a single genetic strain";
RL   Virus Res. 79(1-2):71-80(2001).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .804
FT                   /organism="Potato virus Y"
FT                   /isolate="PN-82"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /virion
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .804
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="capsid protein"
FT                   /function="coat"
FT                   /db_xref="GOA:Q9DIB0"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q9DIB0"
FT                   /protein_id="CAC19618.1"
FT                   /translation="ANDTIDAGEKSKKDAKPEQGSIQRNPNKGEDKDVNAGTSGTHTVP
FT                   RIKAITSKMRMPKSKGTAVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRVAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGSEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLIRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQSRLFGLDGGVSTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 804 BP; 275 A; 159 C; 202 G; 168 T; 0 other;

aj303096 Length: 804  10-NOV-2006  Type: N  Check: 1607  ..

       1  gcaaatgata caattgatgc tggagagaaa agtaagaaag atgcgaaacc
      51  agaacagggt agcatccagc gaaatcctaa caagggagag gataaggacg
     101  tgaacgccgg cacatctggg acacatactg tgccaagaat aaaggctatt
     151  acgtcaaaaa tgagaatgcc taaaagcaaa ggaacagccg tgctaaactt
     201  agaacacttg ctcgaatatg ctccacaaca gatagatatc tcaaatactc
     251  gagcaactca atcacagttt gatacgtggt atgaagcagt gcgggtggca
     301  tacgacatag gggaaactga aatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa tgtcaacgga gtttgggtta
     401  tgatggatgg aagtgaacaa gttgaatatc cgttgaaacc aatcgttgag
     451  aatgcaaaac cgaccctcag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttaat tcgaaatctg cgggatggaa gtttagcgcg ctatgccttt
     601  gacttttacg aagtcacgtc acgaacacca gtgagggcta gggaagcgca
     651  catacaaatg aaggccgcag cattaaaatc agcccaatct cgacttttcg
     701  ggttggacgg tggcgtcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tttctccaag tatgcatact ctacttggag tcaagaacat
     801  gtga