Sequence of DPV Potato virus Y

Potato virus Y partial cp gene for capsid protein, genomic RNA, isolate P21-82

ACC No: AJ303097

Dated: 2006-11-10 | Length: 804 | CRC: 233350733

                
ID   AJ303097; SV 1; linear; genomic RNA; STD; VRL; 804 BP.
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AC   AJ303097;
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DT   21-DEC-2000 (Rel. 66, Created)
DT   10-NOV-2006 (Rel. 89, Last updated, Version 2)
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DE   Potato virus Y partial cp gene for capsid protein, genomic RNA, isolate
DE   P21-82
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KW   capsid protein; cp gene.
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OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-804
RA   Ponz Ascaso F.;
RT   ;
RL   Submitted (19-DEC-2000) to the EMBL/GenBank/DDBJ databases.
RL   Ponz Ascaso F., Mejora Genetica y Biotecnologia, Instituto Nacional de
RL   Investigacion y Tecnologia Agraria y A, Autovia A-6, Km. 7.5, Madrid,
RL   28040, SPAIN.
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RN   [2]
RA   Romero A., Blanco-Urgoiti B., Soto M.J., Fereres A., Ponz F.;
RT   "Characterization of typical pepper-isolates of PVY reveals multiple
RT   pathotypes within a single genetic strain";
RL   Virus Res. 79(1-2):71-80(2001).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .804
FT                   /organism="Potato virus Y"
FT                   /isolate="P21-82"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /virion
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .804
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="capsid protein"
FT                   /function="coat"
FT                   /db_xref="GOA:Q9DIA9"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q9DIA9"
FT                   /protein_id="CAC19619.1"
FT                   /translation="ANDTIDAGENSKKDAKPEQGSIQRNPNKGKEKDVNAGTSGTHTVP
FT                   RIKAITSKMRMPKSKGTAVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRTAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGSEQVGYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLIRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQSRLFGLDGGVSTQEENTERHTTEDVSPSMHTLLGVKNM"
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SQ   Sequence 804 BP; 278 A; 163 C; 198 G; 165 T; 0 other;

aj303097 Length: 804  10-NOV-2006  Type: N  Check: 856  ..

       1  gcaaacgata caattgatgc tggagagaac agtaagaaag acgctaaacc
      51  agaacagggt agcatccagc gaaatcccaa caagggaaaa gagaaggacg
     101  tgaatgccgg tacatctgga acacatactg taccaagaat aaaggctatt
     151  acgtcaaaaa tgagaatgcc taaaagcaaa ggaacggccg tgctaaactt
     201  agaacacttg ctcgaatatg ctccacaaca gatagacatc tcaaatactc
     251  gggcaactca atcacagttt gacacgtggt atgaagcagt gcggacggca
     301  tacgacatag gggaaactga aatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa tgtcaacgga gtttgggtta
     401  tgatggatgg aagtgaacaa gttggatatc cgttgaaacc aatcgttgaa
     451  aatgcaaaac cgacccttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatac atgccacgat
     551  atggtttaat tcgaaatctg cgggatggaa gtttagcgcg ctatgccttt
     601  gacttttatg aagtcacatc acgaacacca gtgagggcta gggaagcgca
     651  catacaaatg aaggccgcag cattaaaatc agcccaatct cgacttttcg
     701  ggttggacgg tggcgtcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tttctccaag tatgcatact ctacttggag tcaagaacat
     801  gtga