Sequence of DPV Goose circovirus
Goose circovirus complete genome
ACC No: AJ304456
Dated: 2001-08-07 | Length: 1821 | CRC: -636190287
!!NA_SEQUENCE 1.0 ID GCI304456 standard; circular DNA; VRL; 1821 BP. XX AC AJ304456; XX SV AJ304456.1 XX DT 07-AUG-2001 (Rel. 68, Created) DT 07-AUG-2001 (Rel. 68, Last updated, Version 1) XX DE Goose circovirus complete genome XX KW ORFc1; ORFc2; ORFV2; rep gene; replication associated protein. XX OS goose circovirus OC Viruses; ssDNA viruses; Circoviridae; Circovirus. XX RN [1] RP 1-1821 RA Weston J.H.; RT ; RL Submitted (13-DEC-2000) to the EMBL/GenBank/DDBJ databases. RL Weston J.H., Veterinary Sciences, The Queen's University of Belfast, Stoney RL Road, Belfast, Northern Ireland, UK, BT4 3SD, UNITED KINGDOM. XX RN [2] RA Todd D., Weston J.H., Soike D., Smyth J.A.; RT "Genome sequence determinations and analyses of novel circoviruses from RT goose and pigeon"; RL Virology 286:354-362(2001). XX DR SPTREMBL; Q91EK1; Q91EK1. DR SPTREMBL; Q91EK2; Q91EK2. DR SPTREMBL; Q91EK3; Q91EK3. DR SPTREMBL; Q91EK4; Q91EK4. XX FH Key Location/Qualifiers FH FT source 1. .1821 FT /country="Germany" FT /db_xref="taxon:146032" FT /virion FT /organism="goose circovirus" FT /specific_host="Anser sp." FT CDS join(1613. .1821,1. .154) FT /db_xref="SPTREMBL:Q91EK4" FT /note="ORFV2" FT /product="hypothetical protein" FT /protein_id="CAC50260.1" FT /translation="MFCVCLTLKIVYFDLIRPMCSLRRLYRRLRLVARLRREYRLRGLA FT RYSGMMGSGFLWAGTKPLQAPYILLPAPVLRTPHPTRKLQTPLNEPPRTWRKTATTHTR FT GGSSLLITLPLKITVP" FT CDS 73. .954 FT /db_xref="SPTREMBL:Q91EK3" FT /gene="rep" FT /product="putative replication associated protein" FT /protein_id="CAC50261.1" FT /translation="MAKNGNYSYKRWVFTINNPTFEDYCAVVEFCNLDNCKFAIVGEEK FT GEKEGTPHLQGFLSLRKNAKAAALEENLGGRAWLSRARGSDEDNEEYCSKESTYLRVGE FT PNRKGRSSDLPDAASDVLAGLPITDVARKYPTTYVMFGRGLERLRQLIVETARDWKTEV FT IVLIGRPGSGKSRYAFEFPAREKYYKSRGKWWDGYNGQDVVVMDDFYGWLPYDDLLRIC FT DRYPLRVEYKGGMTQFVAKTLIITSNREPRDWYKCEFDVSALYRRINQYLILTPDGYAP FT APEFMLPFKINY" FT CDS complement(128. .427) FT /db_xref="SPTREMBL:Q91EK2" FT /note="ORFC2" FT /product="hypothetical protein" FT /function="unknown" FT /protein_id="CAC50262.1" FT /translation="MPRRGDHLSDLFGLVHRLEGMSTLWNNILHYLRQIPELETARLFL FT PGSLQAQQLSHSFADSGIPAGEVCLLSLLSLRRLSRTCSYPDCRTQLRHSNLQR" FT CDS complement(1009. .1761) FT /db_xref="SPTREMBL:Q91EK1" FT /note="ORFC1" FT /product="capsid" FT /protein_id="CAC50263.1" FT /translation="MPLYRARPRSLYSRRRRATNRRRRYRRRRLHIGRIRSKYTIFNVK FT QTQNISFTFFGTGSPDKNKWQAMSLEAVQSSGTSPKPGINLRFAVFGDRLPGTGNQYHY FT PFDYYMIRMVKVELRPAFNPFQRVRTQGSTYIDKEGNITTTTSGGEWNVDPYAAMSSRK FT TWSPHRYHKRVFVPKPTIQQGGTGTNIWSTWYTPGGRQLWLNSIQDNVVFYGMGMSLRQ FT AEDTAAPLTVEATITYYIRFGQWTGLSP" XX SQ Sequence 1821 BP; 405 A; 393 C; 503 G; 520 T; 0 other; AJ304456 Length: 1821 September 18, 2002 10:52 Type: N Check: 7977 .. 1 accggcgcct gtactccgta ctccgcaccc tacgaggaag ctgcagacac 51 cgcttaacga gccaccccga acatggcgaa aaacggcaac tactcataca 101 agaggtgggt cttcactatt aataacccta cctttgaaga ttactgtgcc 151 gtagttgagt tctgcaatct ggataactgc aagttcgcga tagtcggcga 201 agagaaagga gagaaagaag gcacacctca cctgcaggga ttcctgagtc 251 tgcgaaagaa tgcgaaagct gctgcgcttg aagagaacct gggaggaaga 301 gcctggctgt ctcgagctcg gggatctgac gaagataatg aagaatattg 351 ttccaaagag tcgacatacc ttcgagtcgg tgaaccaaac cgaaaaggtc 401 gctcaagtga tctccccgac gcggcatccg atgtgctcgc tggtctgccg 451 ataactgacg tggcccggaa gtacccgacg acttatgtaa tgtttgggcg 501 gggcttagag cggttgcgtc agctgatcgt ggagaccgct cgtgattgga 551 agacggaggt catcgttctg attgggcggc ctggaagcgg gaagagccgt 601 tacgcgtttg aatttcccgc gcgtgaaaag tattataaat ctcgcgggaa 651 gtggtgggat ggctataatg ggcaggatgt ggttgtcatg gatgattttt 701 atgggtggct gccttacgat gaccttttaa ggatctgtga tcgctatcct 751 ttaagggtag agtacaaggg aggtatgacc cagttcgttg ctaagacact 801 tataattacc tctaataggg agccgcgtga ttggtataaa tgcgagtttg 851 atgtgtctgc attgtatcgg agaattaatc agtacctgat attaaccccc 901 gacggatatg cacccgcccc cgagtttatg ctgccgttta aaataaacta 951 ctaaagtcct ggttaaggtt agaaacagga acgtttattg tgtaaaatta 1001 caataaagtt atggtgaaag cccagtccat tgtccgaatc ttatgtaata 1051 ggtaatggtt gcttctactg tcagaggtgc tgcggtgtct tctgcttgtc 1101 ttagtgacat gcccattccg tagaatacta cgttgtcttg aattgagttc 1151 agccatagtt gtcttcctcc tggggtgtac caggtgctcc atatatttgt 1201 tcctgttcct ccctgttgga tggttggttt cgggacaaat actcttttgt 1251 ggtatctgtg aggtgaccac gttttcctgg agctcattgc tgcgtagggg 1301 tctacgttcc actctccacc gctggttgtg gttgtaatgt tgccttcttt 1351 gtctatgtat gtgctgcctt gtgtgcgtac tctttggaag gggttaaatg 1401 cgggacggag ttccaccttt accatgcgta tcatgtagta gtcgaacggg 1451 taatggtatt ggtttcctgt tcctggcaat ctgtctccga agactgcgaa 1501 ccgtaggtta attccgggtt tggggctggt gccagatgat tgtactgctt 1551 ccaggctcat tgcttgccat ttgtttttgt ctgggcttcc ggttccgaag 1601 aacgtgaatg atatgttctg cgtttgtttg acattgaaga ttgtgtactt 1651 tgaccttatt cgtccgatgt gtagccttcg tcgtctgtat cgtcgtctgc 1701 ggttggttgc ccgcctacga cgagaatata gactccgcgg tctcgcgcga 1751 tacagcggca tgatgggcag tggcttcctg tgggcgggga caaaaccgtt 1801 acaggcgccg tatatattat t