Sequence of DPV Carnation mottle virus
Carnation mottle virus p7 gene, p9 gene and cp gene, genomic RNA, isolate sp-1
ACC No: AJ309503
Dated: 2005-04-15 | Length: 1382 | CRC: 1895724602
!!NA_SEQUENCE 1.0 ID CMO309503 standard; genomic RNA; VRL; 1382 BP. XX AC AJ309503; XX SV AJ309503.1 XX DT 30-JAN-2001 (Rel. 66, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Carnation mottle virus p7 gene, p9 gene and cp gene, genomic RNA, isolate DE sp-1 XX KW coat protein; cp gene; movement protein; p7 gene; P9 gene. XX OS Carnation mottle virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; OC Carmovirus. XX RN [1] RP 1-1382 RA Pallas V.; RT ; RL Submitted (29-JAN-2001) to the EMBL/GenBank/DDBJ databases. RL Pallas V., Biologia del estres, Instituto de Biologia Molecular y Celular RL de Plantas-CSIC, Avenida de los Naranjos s/n, 46022 Valencia, SPAIN. XX RN [4] RX DOI; 10.1007/s007050170051. RX MEDLINE; 21578632. RX PUBMED; 11722023. RA Canizares M.C., Marcos J.F., Pallas V.; RT "Molecular varaibility of twenty-one geographically distinct isolates of RT Carnation mottle virus (CarMV) and phylogenetic relationships within the RT Tombusviridae family"; RL Arch. Virol. 146(10):2039-2051(2001). XX FH Key Location/Qualifiers FH FT source 1. .1382 FT /country="Spain" FT /db_xref="taxon:11986" FT /mol_type="genomic RNA" FT /organism="Carnation mottle virus" FT /isolate="sp-1" FT /variety="889PSFV" FT CDS 1. .186 FT /db_xref="GOA:Q98VP1" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProt/TrEMBL:Q98VP1" FT /note="The central region contains an RNA-binding motif" FT /gene="p7" FT /product="movement protein" FT /protein_id="CAC27486.1" FT /translation="MDIEPEVPVVEKQMLAGNSGKQKTRRSVAKDAIRKPASDSTNGGN FT WVNVADKIEVHIHFNF" FT CDS 92. .346 FT /db_xref="UniProt/TrEMBL:Q9DJV3" FT /gene="p9" FT /product="movement protein" FT /protein_id="CAC27487.1" FT /translation="MPSVNLHLIVLTGVIGLMLLIRLRCTFTSTFSLPPLVTLNQIIAL FT SFCGLLLNSISRAERACYYNYSVDSSKQQHISISTPNGK" FT CDS 336. .1382 FT /db_xref="GOA:Q98VH4" FT /db_xref="HSSP:2TBV" FT /db_xref="InterPro:IPR000937" FT /db_xref="UniProt/TrEMBL:Q98VH4" FT /gene="cp" FT /product="coat protein" FT /protein_id="CAC27488.1" FT /translation="MENKGEKIAMNPTVQTLAQKGDKLAVKLVTRGWASLSTNQKRRAE FT MLAGYTPAILAFTPRRPRMTNPPPRTSRNSPGQAGKSMTMSKTELLSTVKGTTGVIPSF FT EDWVVSPRNVAVFPQLSLLATNFNKYRITALTVKYSPACSFETNGRVALGFNDDASDTP FT ATTKVGFYDLGKHVETAAQTAKDLVIPVDGKTRFIRDSASDDAKLVDFGRIVLSTYGFD FT KADTVVGELFIQYTIVLSDPTKTAKISQASNDKVSDGPTYVVPSVNGNELQLRVVAAGK FT WCIIVRGTVEGGFTKPTLIGPGISGDVDYESARPIAVCELVTQMEGQILNITKTSAEQP FT LQWVVYRM" XX SQ Sequence 1382 BP; 398 A; 313 C; 360 G; 311 T; 0 other; AJ309503 Length: 1382 April 19, 2005 08:56 Type: N Check: 6420 .. 1 atggatattg aaccggaagt accagtagtt gagaagcaaa tgctcgctgg 51 gaatagtggg aaacaaaaga cacgtagatc ggtggccaag gatgccatcc 101 gtaaacctgc atctgatagt actaacgggg gtaattgggt taatgttgct 151 gataagattg aggtgcacat tcacttcaac ttttagtttg cccccgctgg 201 taactttaaa tcagataata gcgttgtcat tttgtggtct tctattaaac 251 agcatctctc gggcagaaag agcttgctat tacaactact ctgttgatag 301 ttctaaacaa caacacattt cgataagtac accaaatgga aaataaagga 351 gaaaagatcg cgatgaatcc cactgtgcaa acattggcgc agaaggggga 401 caagttggcc gtgaagttgg tgacaagagg gtgggcctct ctgagtacga 451 accagaagag gagagctgaa atgcttgctg gatacactcc agcgatccta 501 gcctttacac cccgacgacc acggatgaca aaccctcctc caagaaccag 551 taggaattca ccaggacaag ctggaaagtc catgacgatg agtaagaccg 601 aattattaag caccgtcaag ggtaccacgg gtgttatccc aagctttgaa 651 gactgggtcg tttccccccg aaacgtagcc gtcttccctc aactctcgct 701 gctggcgacg aacttcaaca agtaccgcat tactgcgctc actgtgaagt 751 actcacccgc gtgcagcttc gagaccaatg ggagggtggc tctgggattc 801 aacgatgacg cttcggacac accggcaacc accaaggttg gtttttacga 851 tctgggtaaa catgtggaga ctgctgcaca gacagccaaa gatctagtga 901 taccagtcga cggcaaaacc cggttcatca gggactcggc tagtgatgat 951 gccaaactag tcgattttgg acgaatagtc ttgtcaacat acgggtttga 1001 caaggctgac actgtggtgg gcgaattgtt tatacagtac acgattgtgc 1051 tgagtgaccc aaccaagacg gccaaaattt cacaggcaag caacgataag 1101 gtgtcggacg gaccaacgta tgtggtccct tcggttaatg gcaacgagct 1151 acaactaaga gtggtagccg ctgggaaatg gtgcatcata gtgcggggta 1201 cggttgaggg aggcttcacc aaacccacac ttattgggcc aggcatcagc 1251 ggtgatgtgg actatgaaag tgccagacct atcgccgttt gtgaattggt 1301 gacacaaatg gagggccaga tattgaatat caccaagacc tcagcagaac 1351 aaccactcca atgggttgtt tataggatgt ga