Sequence of DPV Onion yellow dwarf virus
Onion yellow dwarf virus partial gene for polyprotein, isolate yn1: Yunnan, genomic RNA
ACC No: AJ409312
Dated: 2002-02-05 | Length: 1618 | CRC: -1414289773
!!NA_SEQUENCE 1.0
ID OYE409312 standard; RNA; VRL; 1618 BP.
XX
AC AJ409312;
XX
SV AJ409312.1
XX
DT 05-FEB-2002 (Rel. 70, Created)
DT 05-FEB-2002 (Rel. 70, Last updated, Version 1)
XX
DE Onion yellow dwarf virus partial gene for polyprotein, isolate yn1: Yunnan,
DE genomic RNA
XX
KW coat protein; NIb protein; polyprotein.
XX
OS Onion yellow dwarf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1618
RA Adams M.J.;
RT ;
RL Submitted (20-MAR-2001) to the EMBL/GenBank/DDBJ databases.
RL Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL AL5 2JQ, UNITED KINGDOM.
XX
RN [2]
RA Chen J., Chen J.P., Adams M.J.;
RT "Characterisation of some carla- and potyviruses from bulb crops in China";
RL Arch. Virol. 147:419-428(2002).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1618
FT /country="China:Yunnan"
FT /db_xref="taxon:43130"
FT /virion
FT /organism="Onion yellow dwarf virus"
FT /isolate="yn1: Yunnan"
FT /specific_host="Allium sativum"
FT CDS <1. .1410
FT /codon_start=1
FT /product="polyprotein"
FT /product="hypothetical protein"
FT /protein_id="CAC84173.1"
FT /translation="GNNSGQPSTVVDNTIMVMLSVQYALRKCGIGLDKQTEVIKYFCNG
FT DDLLIAIHPEYESILDKFQQYFQELGLDYDFSSRSKSKEDVYFMSHRGLLRDGIYIPKL
FT DRERVVSILEWDRADKPEHRLEAICASMIEAWGYPDLLHEIRKFYQWLLEQAPYNVIAL
FT NGKAPYIAETALRKLFTDIDASEGELEKYYELYMSLENDEAIPKEVRYQAGEGEDAAAQ
FT SSTSQQVAKQKDKDVDTGTTGKFAIPRIKALSDKMRFPKVGKTVVLNAEHLLAYKPEQI
FT ELYNTRSTKQQFENWYNAIKKEYDVNDEQMKILLNGLMVWCIENGTSPNLSGNWTMMDG
FT EEQVEYPLAPIVDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGIQRNLTELSLA
FT RYAFDFYEMTSKTPKRAKEAHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADIN
FT KNQHTLLGIKM"
FT mat_peptide <1. .636
FT /product="NIb protein"
FT mat_peptide 637. .1407
FT /product="coat protein"
FT 3'UTR 1411. .1618
XX
SQ Sequence 1618 BP; 547 A; 273 C; 378 G; 420 T; 0 other;
AJ409312 Length: 1618 February 12, 2002 17:24 Type: N Check: 7400 ..
1 gggaataata gtgggcagcc atctaccgtt gtcgataaca caatcatggt
51 tatgctaagt gtacaatacg ccttgcggaa atgtggcata ggattggata
101 aacagactga ggttattaaa tacttttgca atggtgatga tctattgatc
151 gcaatacatc cagaatacga aagcatactt gacaaatttc aacagtattt
201 tcaggaactt ggcttagatt atgacttttc aagtaggagc aaatcaaagg
251 aagatgtgta ttttatgtcc catagaggat tactcagaga cgggatttat
301 ataccaaagt tggacagaga acgtgttgta tcaatacttg aatgggatcg
351 agctgataaa cctgaacata ggttggaagc catatgtgca tctatgatcg
401 aggcatgggg ttatccagac cttctacatg aaattcgtaa gttttaccaa
451 tggctcctag aacaagctcc gtataatgtg atagctctga acggaaaagc
501 accctatata gcggaaacag ctcttagaaa gttgtttact gatattgatg
551 cgagtgaggg ggagttagag aaatattacg aattatatat gagtctcgag
601 aatgacgaag caattccgaa ggaagttcgt taccaggcag gggaaggaga
651 agacgcagca gcacaatcaa gtacgtcaca acaagttgca aagcaaaagg
701 ataaagacgt tgacactggc accactggta agtttgcaat tcctagaatc
751 aaggcgctct ctgacaaaat gagatttcca aaagttggta aaactgttgt
801 actcaatgca gaacacttgc tggcatataa accagaacaa attgaattgt
851 acaatacaag atcaacaaaa cagcagtttg agaactggta taacgcaata
901 aagaaggaat acgatgttaa tgatgagcaa atgaagatat tgctgaatgg
951 cttaatggtt tggtgcattg agaatggaac atctcctaat ttatcaggaa
1001 attggactat gatggacggc gaagaacaag ttgagtatcc actggcgcca
1051 atcgtggaca atgcaaaacc aacatttaga cagataatgg cgcatttcag
1101 tgatgcagct gaagcataca ttgaatatag aaacgccacg gaaaaataca
1151 tgccccggta tggaattcag cgaaacttaa cagaacttag tttggcacgt
1201 tacgcatttg atttttatga gatgacttcg aaaactccca aacgagcaaa
1251 agaagcgcac atgcaaatga aggcggctgc ggttagaggg gcaactaacc
1301 gtttgtttgg cttggatggt aacgtcaaca caacagaaga ggacacggaa
1351 agacacacgg ctgcggatat taacaagaac cagcacacgt tgctcggtat
1401 taaaatgtga agccatgttg tgtttttagc tttatatata tatcgttata
1451 taaggacgta tgtaatatgt aatccttttc atttcgttta atctgacttc
1501 gagcaacgaa atgtggtgta ccactagttg tggcgaacga tatggttaaa
1551 catctgtgat taatgtcgaa cttcatgaga gtgacgtatc acgaggtgga
1601 ttttgatgtg aattacgg