Sequence of DPV Dobrava-Belgrade virus
Dobrava virus complete S segment gene for nucleocapsid protein, strain DOBV/Ano-Poroia/Afl9/1999
ACC No: AJ410615
Dated: 2003-04-04 | Length: 1673 | CRC: -1414449352
!!NA_SEQUENCE 1.0
ID DVI410615 standard; RNA; VRL; 1673 BP.
XX
AC AJ410615;
XX
SV AJ410615.1
XX
DT 27-MAR-2003 (Rel. 75, Created)
DT 04-APR-2003 (Rel. 75, Last updated, Version 2)
XX
DE Dobrava virus complete S segment gene for nucleocapsid protein, strain
DE DOBV/Ano-Poroia/Afl9/1999
XX
KW nucleocapsid protein; S segment gene.
XX
OS Dobrava virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus.
XX
RN [1]
RP 1-1673
RA Nemirov K.;
RT ;
RL Submitted (08-MAY-2001) to the EMBL/GenBank/DDBJ databases.
RL Nemirov K., Department of Virology, University of Helsinki, Haartman
RL institute, Haartmaninkatu 3, P.O. Box 21, FIN-00014, FINLAND.
XX
RN [2]
RA Nemirov K., Vapalahti O., Papa A., Plyusnina A., Lundkvist A.,
RA Antoniadis A., Plyusnin A.;
RT "Genetic characterization of new Dobrava hantavirus isolate from Greece";
RL J. Med. Virol. 69:408-416(2003).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1673
FT /country="Greece:Ano-Poroia"
FT /db_xref="taxon:12506"
FT /note="S segment"
FT /virion
FT /organism="Dobrava virus"
FT /strain="DOBV/Ano-Poroia/Afl9/1999"
FT /specific_host="Apodemus flavicollis"
FT CDS 36. .1325
FT /gene="S segment"
FT /product="nucleocapsid protein"
FT /protein_id="CAC85163.1"
FT /translation="MATLEELQKEINNHEGQLVIARQKVKDAEKQYEKDPDDLNKRALS
FT DRESIAQSIQGKIDELRRQLADRVAAGKNIGKERDPTGLDPGDHLKEKSMLSYGNVIDL
FT NHLDIDEPTGQTADWLSIVVYLTSFVVPILLKALYMLTTRGRQTTKDNKGMRIRFKDDS
FT SFEDVNGIRKPKHLFLSMPNAQSSMKADEITPGRFRTAICGLYPAQVKARNLISPVMSV
FT IGFLALAKNWTERVEEWLDLPCKLLSEPSPTSLTKGPSTNRDYLNQRQGALAKMETKEA
FT QAVRKHAIDAGCNLIDHIDSPSSIWVFAGAPDRCPPTCLFIAGMAELGAFFAVLQDMRN
FT TIMASKTIGTSEEKLKKKSSFYQSYLRRTQSMGIQLDQRIIVLFMVDWGKEAVDSFHLG
FT DDMDPELRGLAQALIDQKVKEISNQEPLKL"
XX
SQ Sequence 1673 BP; 509 A; 352 C; 383 G; 429 T; 0 other;
AJ410615 Length: 1673 April 15, 2003 08:31 Type: N Check: 5421 ..
1 tagtagtagg ctccctaaaa agcactacac taaagatggc aacattagag
51 gaactccaaa aagaaatcaa caaccacgag ggccaattgg tgatagccag
101 gcagaaggtg aaagatgcag aaaagcagta tgaaaaggat cctgacgacc
151 tgaataaaag ggcattgagt gaccgggaaa gcattgcaca atcaattcag
201 ggaaaaatag atgaattaag gagacagctg gctgatcgtg tggcagcagg
251 gaaaaacatt ggcaaagaga gggacccaac tggactagac cctggagatc
301 acctcaaaga gaagtcaatg ctcagttatg gaaatgtcat tgacctcaac
351 catcttgaca ttgatgaacc tacagggcaa accgcagact ggctgagcat
401 tgtggtctac ctgacatcat tcgtggttcc aatattgttg aaggctcttt
451 acatgcttac caccagaggg agacaaacta ctaaagacaa taagggaatg
501 agaattcgat ttaaggatga cagctctttt gaagatgtga atgggattag
551 aaagccaaag cacctgttct tgtcaatgcc caatgcacaa tctagcatga
601 aggcagatga gattacacca ggtcggttca ggactgcaat ttgtggacta
651 tacccagccc aggtgaaggc aaggaactta atcagtcctg tgatgagtgt
701 gattgggttt ttagcccttg caaagaactg gacagagcgg gttgaggaat
751 ggcttgacct cccgtgcaag ctactatctg agccatctcc aacgtctttg
801 accaaaggcc catccaccaa tcgtgactac ttgaatcaaa gacaaggagc
851 gcttgcaaaa atggaaacaa aagaagctca ggctgtgagg aaacatgcca
901 tagatgctgg ctgcaacctt atcgaccata tagactcacc atcatcaatc
951 tgggtctttg caggagcacc cgacagatgc cctcctacct gcctgttcat
1001 tgcaggcatg gcagagctag gtgcattctt tgctgttctc caggatatga
1051 ggaacaccat catggcgtca aaaactatcg gaacatctga ggagaagcta
1101 aagaagaaat catcttttta ccaatcttac ctacggagga cacaatctat
1151 ggggatacaa ctggaccagc gcatcatcgt gctcttcatg gttgactggg
1201 gaaaagaggc agttgatagt tttcatcttg gtgatgatat ggatcctgag
1251 ctccggggcc tggcacaggc attaattgat caaaaagtga aggaaatatc
1301 taatcaggaa ccgcttaagc tttaattgta tttgttgcat tatcccatgc
1351 tttatgtaat cccacgtatg ctgcattaac tgcttggact ggaattatta
1401 tactactgat tggtgaatgt atttgcacta ggggttgggt tgggtgggcc
1451 atttatccgt tatgtaatct cagggtggtt taggacgtca ccttaagtga
1501 cttttttctg tatatatgga tgtagatttc atttgatctg tactaacatc
1551 ttatttcctt cttttccttt ctttactaac aacaactacc tacctcaaaa
1601 caacaacact acctcaacaa ctactacctc attgatttgc ttcctgaatg
1651 tctctttagg gagtctacta cta