Sequence of DPV Dobrava-Belgrade virus
Dobrava virus complete M segment gene for glycoprotein precursor (G1-G2), strain DOBV/Ano-Poroia/Afl9/1999)
ACC No: AJ410616
Dated: 2003-04-04 | Length: 3635 | CRC: -965229445
!!NA_SEQUENCE 1.0
ID DVI410616 standard; RNA; VRL; 3635 BP.
XX
AC AJ410616;
XX
SV AJ410616.1
XX
DT 27-MAR-2003 (Rel. 75, Created)
DT 04-APR-2003 (Rel. 75, Last updated, Version 2)
XX
DE Dobrava virus complete M segment gene for glycoprotein precursor (G1-G2),
DE strain DOBV/Ano-Poroia/Afl9/1999)
XX
KW G1-G2 precursor; glycoprotein precursor; M segment gene.
XX
OS Dobrava virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus.
XX
RN [1]
RP 1-3635
RA Nemirov K.;
RT ;
RL Submitted (08-MAY-2001) to the EMBL/GenBank/DDBJ databases.
RL Nemirov K., Department of Virology, University of Helsinki, Haartman
RL institute, Haartmaninkatu 3, P.O. Box 21, FIN-00014, FINLAND.
XX
RN [2]
RA Nemirov K., Vapalahti O., Papa A., Plyusnina A., Lundkvist A.,
RA Antoniadis A., Plyusnin A.;
RT "Genetic characterization of new Dobrava hantavirus isolate from Greece";
RL J. Med. Virol. 69:408-416(2003).
XX
FH Key Location/Qualifiers
FH
FT source 1. .3635
FT /country="Greece:Ano-Poroia"
FT /db_xref="taxon:12506"
FT /note="M segment"
FT /virion
FT /organism="Dobrava virus"
FT /strain="DOBV/Ano-Poroia/Afl9/1999"
FT /specific_host="Apodemus flavicollis"
FT CDS 41. .3448
FT /gene="M segment"
FT /product="glycoprotein precursor (G1-G2)"
FT /protein_id="CAC85164.1"
FT /translation="MIMWGLLLTMILIDFGASLRNVYDMKIECPHSINFGESSVTGKVE
FT LPPLLLTDAEALVPESSCNMDNHQSMSIIQKVTKVSWRKKADKAQAAKDSFETTSSEVN
FT LKGTCALSHRMVEESYRNRRSVICYDLSCNSTHCKPTMHMIVPVHSCNMMKSCLVGLGP
FT YRIQIVYERTYCTTGILTEGKCFVPDQSIVNVIKNGVFDIASVSIVCFFIRVKGTNYKI
FT MASIKTATANNCNDTDNKVQGYYLCIVGGNSSPVYAPSTTDFRSMEALASLLRAPHGED
FT HDLSGEEVATYSIAGQIEGKIPHTANAANMLFTAFSGIPSYSSLSVFIGSQDGPVIYSP
FT GLFPRLNQSSCDKIALPLIWEGYIDLPGYYETVHPCNVFCVLSGPGASCEAFSEGGIFN
FT ITSPTCLVSKQNRFRAAEQQVNFVCQRVDQDIVIYCNGQKKTILTKTLVIGQCIYSVTS
FT LFSIMPGVAHSIAIELCVPGFHGWATAALLTTFCFGWILILSITLAVLVVLKFFAAILH
FT NSSQENRFKIILRKIKEEFEKTKGSMVCEVCKYECETGKELKAHNLSCPQSQCPYCFTH
FT CEPTESAFQAHYKVCQATHRFRDDLKKTITPQSTSPGCYRTLNLFRYKSRCYIFTVWVT
FT LLIIESIMWAASASETVLEPSWNDNAHGVGVVPMHTDLELDFSLPSSSKYTYKRKLTSP
FT LNQEQSVDLHIEIESQGISTSVHALGHWFDGRLNLKTSFHCYGACTKYEYPWHTAKCHF
FT ERDFEYENNWGCNPADCPGIGTGCTACGLYIDQLKPVGSAYKLITVRYSRKVCVQFGEE
FT NLCKTIDMNDCFVTRHVKVCIIGTVSKFSQGDTLVFLGPMEGGGLIFKDWCTSTCQFGD
FT PGDIMSPKDKGFSCPDFTGHFRKKCNFATTPVCEYDGNMVSGYKKVMATIDSFQSFNTS
FT SIHYTDERIEWKDPDGMLKDHLNILVTKDIDFENLGENPCKVGLQTSSIEGAWGSGVGF
FT TLTCQISLTECSRFLTSIKACDMAICYGAQSVTLIRGQNTVKVSGKGGHSGSSFKCCHG
FT TDCSQQGLQASAPHLDKVNGIVEQESEKVYDDGAPQCGISCWFVKSGEWITGIFNGNWI
FT VIVVLVFFFILSLILLSLLCPIRKHKRS"
XX
SQ Sequence 3635 BP; 1101 A; 669 C; 790 G; 1075 T; 0 other;
AJ410616 Length: 3635 April 15, 2003 08:31 Type: N Check: 8350 ..
1 tagtagtaga ctccgcaaga aatagcagtt aaataacagc atgatcatgt
51 ggggtttact attgacaatg attttgatcg attttggggc atccttaagg
101 aatgtctatg acatgaaaat agaatgccca cattcaatca actttgggga
151 gagtagtgta acaggtaagg tggagctgcc accccttctg cttacagatg
201 cagaggcctt ggtcccggaa agttcttgta acatggacaa ccatcagtcc
251 atgtcaatta tacaaaaagt gacaaaagta agctggagaa aaaaggcaga
301 caaagcccaa gctgccaagg actcatttga gacaacatca agtgaggtta
351 acttaaaggg aacatgtgca ttgagtcata ggatggttga agaatcttac
401 agaaatagga gatcagtaat atgttatgac ttgtcttgca attcaacaca
451 ttgcaagcca acgatgcata tgattgtacc tgtgcactca tgcaacatga
501 tgaaaagctg cctggttggg cttgggcctt atagaatcca aatcgtctat
551 gagagaacct actgtacaac tggtatacta acagaaggga agtgttttgt
601 gccagaccag agtattgtta atgttatcaa gaatggggtg ttcgacatcg
651 caagtgtgag cattgtctgt tttttcatca gagttaaagg gaccaactac
701 aagataatgg caagtattaa aacagcaact gcaaataact gtaatgacac
751 tgacaacaag gttcaaggat attacctttg tattgtcggg ggaaattctt
801 ctcctgtgta tgcaccttca accactgatt ttagatctat ggaggcactt
851 gctagccttt taagagctcc tcatggtgaa gaccatgatt tatctggaga
901 agaggtggca acttactcaa ttgccgggca aattgaaggc aaaatcccac
951 atactgcaaa tgcagcaaac atgctgttta ctgcattctc aggaatccct
1001 agttactctt cattaagtgt ttttatcgga agtcaggacg gacctgttat
1051 atatagccca ggattgtttc ctaggttgaa ccaatcttca tgtgataaga
1101 ttgcactacc attaatatgg gaaggatata tagatctgcc tggctattat
1151 gaaacagttc acccatgtaa tgtcttttgt gtgttatctg gcccaggggc
1201 atcatgtgag gcattctcag aaggtggtat tttcaacatt acatccccta
1251 cttgccttgt gtcaaagcaa aataggttca gagctgctga gcagcaagtc
1301 aactttgtgt gccagcgagt tgaccaagat attgtcatct actgtaatgg
1351 acaaaagaag acaattttaa ctaagacatt agtgattggg cagtgtattt
1401 actcagtgac tagtttattt tcaataatgc ctggggtagc acattcaatt
1451 gcaattgaat tatgtgtacc agggttccat ggttgggcaa ctgctgctct
1501 tctcactaca ttctgctttg gctggatact gatcctttcc attacattag
1551 ctgtgttggt tgtcctgaag ttttttgccg caatcttaca taatagctct
1601 caagaaaacc ggtttaaaat tatcttaaga aagattaaag aagaatttga
1651 aaagactaaa ggctcaatgg tctgtgaagt gtgcaagtat gagtgtgaaa
1701 cagggaagga gcttaaagcc cataatttat cttgccctca gtcacagtgt
1751 ccttattgct ttacacactg tgagcctaca gaatctgcct ttcaagcaca
1801 ttataaagtg tgccaagcaa cacacagatt tagggatgat ttaaagaaaa
1851 caataacacc tcaatcaaca agcccaggtt gttaccggac attaaatctt
1901 tttaggtata aaagtagatg ttacatcttt acagtgtggg tgaccttact
1951 aatcattgaa tcaatcatgt gggcagctag tgcatcagaa actgtcttgg
2001 agccaagctg gaatgacaat gcacatggtg ttggcgttgt cccaatgcat
2051 actgacctgg aacttgattt ctctcttcca tcaagttcta agtacacata
2101 taagagaaaa ctgacaagtc cattgaatca agaacaatca gtagatcttc
2151 acatagagat agagagtcaa gggatctcta caagtgttca tgcattaggt
2201 cattggtttg atggaaggct taacctaaag acatcttttc attgttatgg
2251 tgcatgtact aagtatgaat acccttggca cacggcaaaa tgccactttg
2301 aaagagattt cgaatatgag aacaattggg ggtgtaatcc tgctgattgc
2351 cctgggattg gtactggctg tactgcatgc gggctataca ttgaccagct
2401 taaacctgta ggcagtgcat ataagctgat cacagtccgt tacagccgta
2451 aagtatgtgt tcagtttggt gaagaaaatc tatgcaagac aattgatatg
2501 aatgattgct ttgttacaag acatgttaaa gtatgtatca tcggtacagt
2551 ttcaaagttc tcgcaaggtg ataccctagt attcctaggc cctatggaag
2601 gtgggggttt gatatttaag gattggtgca ctagcacatg ccaatttggt
2651 gatccaggag acattatgag tcctaaagac aaaggtttca gctgccctga
2701 cttcacaggc catttccgga aaaaatgcaa ctttgcaaca acacctgtgt
2751 gcgagtatga tggtaatatg gtctctgggt ataagaaagt aatggcaact
2801 attgattcct ttcaatcatt taacactagt tcaattcatt atacagatga
2851 aaggattgag tggaaagacc cggatggaat gcttaaggac caccttaata
2901 tacttgtcac aaaggatatt gactttgaaa accttggaga gaacccgtgt
2951 aaagtaggac ttcaaacatc atcaatagaa ggtgcatggg gttctggggt
3001 tggtttcact ctcacttgtc aaatctcact gacagagtgt tcacgctttc
3051 taacatcaat caaagcatgt gacatggcaa tttgttatgg tgcacaaagt
3101 gttacactca ttagaggcca aaacacagtg aaggtttccg ggaagggtgg
3151 gcatagtggc tcttcattca agtgttgcca tggaacagat tgctctcaac
3201 aggggctaca agcaagtgca ccgcacctgg ataaggtcaa tgggattgtt
3251 gaacaagaga gtgagaaggt ttatgatgat ggtgcaccac aatgtggcat
3301 ttcatgctgg tttgttaagt ctggggagtg gataacagga attttcaatg
3351 ggaattggat tgtcatagtt gtgcttgttt tcttcttcat attgtcctta
3401 atcttactta gtcttctatg tcccattcgt aagcataaac gctcataagt
3451 acatattagc ttgtccttgt atatagcttt caacaatgca attttatata
3501 tcagtttaaa cttctgtact tattaacttt ttacatttat caacctagtt
3551 atctaaaaaa aataactcct tcattactat aaaccttagt cctttagtac
3601 gtgggtattt ctatatcttg cggagcatac tacta