Sequence of DPV Maize dwarf mosaic virus

Maize dwarf mosaic virus partial CP gene for partial coat protein, genomic RNA, isolate S2

ACC No: AJ416638

Dated: 2001-10-16 | Length: 1102 | CRC: 664916426

                !!NA_SEQUENCE 1.0
ID   MDW416638  standard; RNA; VRL; 1102 BP.
XX
AC   AJ416638;
XX
SV   AJ416638.1
XX
DT   16-OCT-2001 (Rel. 69, Created)
DT   16-OCT-2001 (Rel. 69, Last updated, Version 1)
XX
DE   Maize dwarf mosaic virus partial CP gene for partial coat protein, genomic
DE   RNA, isolate S2
XX
KW   CP gene; partial coat protein.
XX
OS   Maize dwarf mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1102
RA   Achon M.M.A.;
RT   ;
RL   Submitted (14-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Achon M.M.A., Area de Proteccio de Conreus, Centre UDL-IRTA, Alcalde Rovira
RL    Roure,177, Lleida, 25198, SPAIN.
XX
RN   [2]
RA   Achon M.M.A.;
RT   "Genetic diversity among maize dwarf mosaic field isolates";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1102
FT                   /country="Spain"
FT                   /db_xref="taxon:12203"
FT                   /virion
FT                   /organism="Maize dwarf mosaic virus"
FT                   /isolate="S2"
FT   CDS             <1. .868
FT                   /codon_start=2
FT                   /gene="CP"
FT                   /product="partial coat protein"
FT                   /function="capside"
FT                   /protein_id="CAC95033.1"
FT                   /translation="NVDAGQKTDAQKEAEKKAAEEKKAKEAEAKQKETKEKSTEQTGTS
FT                   GTTEKDKDVDAGTSGSVSVPKLKAMSKKMRLPQAKGKNILHLDFLLKYKPQQQDLSNTQ
FT                   ATRAEFDRWYEAVQKEYELDDTQMTVVMSGLMVWCIENGCSPNINGVWTMMDGDEQRTF
FT                   PLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTEKYMPRYGLQRNLTDFSLARYAFDF
FT                   YEISSRTPVRAKEAHMQMKAAAVRGSNTRMFGLDGNVGETQENTERHTAGDVSRNIHSL
FT                   LGVQQGH"
FT   3'UTR           869. .1102
FT                   /gene="CP"
XX
SQ   Sequence 1102 BP; 363 A; 219 C; 263 G; 257 T; 0 other;

AJ416638  Length: 1102  December 21, 2001 15:42  Type: N  Check: 3630  ..

       1  aaatgttgat gcgggacaga aaactgatgc acagaaagag gcagaaaaga
      51  aggcagctga ggaaaagaaa gcaaaagaag ctgaggccaa acaaaaagag
     101  actaaggaaa aatcaactga gcaaaccggt actagtggaa ccacagaaaa
     151  agataaagat gtggatgctg gcacttcagg ttcagtgtca gttcccaagc
     201  tcaaagccat gtccaaaaag atgcgtctac ctcaggcgaa agggaaaaac
     251  atccttcatc tcgatttcct tttaaaatat aagccacagc aacaagattt
     301  atcaaacact caagcaacca gggctgaatt tgatagatgg tatgaagcag
     351  tacagaagga gtacgagctt gatgatacac agatgacggt tgttatgagc
     401  ggattaatgg tctggtgcat cgaaaatggt tgctcaccaa acatcaatgg
     451  cgtctggact atgatggatg gggacgaaca gagaacattt ccactaaaac
     501  cagttattga gaatgcttct ccaactttca gacaaatcat gcatcacttt
     551  agtgatgcag ctgaagcgta cattgagtat agaaattcaa cagaaaaata
     601  tatgccaagg tatggacttc agcgaaactt aaccgacttt agccttgcac
     651  gctatgcatt tgatttttac gagatatcat ctcgaactcc agtgcgtgca
     701  aaggaagccc atatgcagat gaaggctgca gcagtccgcg gttcaaacac
     751  acggatgttc ggcctcgatg ggaatgtcgg agaaacccag gagaatacag
     801  aacggcacac agctggcgac gtcagtcgca acatacactc ccttttggga
     851  gttcagcagg gccattgata cggggtttga cctttacgca gtaatttagt
     901  aatatataat taagctattg tggtgaggtt atacctcgtt agttttatct
     951  atatattatg ctacgtacct actatgtctg caagtgagtg aggttacacc
    1001  tcgacactta tagtaggcac tattactagc ttcgaatcac gagacggacg
    1051  atccattgag tggttctacc acgaggatgc agcgagtttc gtggtgagag
    1101  ac