Sequence of DPV Zucchini yellow mosaic virus
Zucchini yellow mosaic virus genomic RNA for polyprotein gene, NIb protein and coat protein region, isolate Austria 11
ACC No: AJ420016
Dated: 2005-12-19 | Length: 1134 | CRC: -2090194131
ID ZYE420016 standard; genomic RNA; VRL; 1134 BP.
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AC AJ420016;
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SV AJ420016.1
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DT 08-FEB-2002 (Rel. 70, Created)
DT 19-DEC-2005 (Rel. 86, Last updated, Version 2)
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DE Zucchini yellow mosaic virus genomic RNA for polyprotein gene, NIb protein
DE and coat protein region, isolate Austria 11
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KW coat protein; NIb protein; polyprotein.
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OS Zucchini yellow mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1134
RA Pfosser M.F.;
RT ;
RL Submitted (08-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL Pfosser M.F., Institute of Botany, Vienna University, Rennweg 14, A-1030
RL Vienna, AUSTRIA.
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RN [2]
RA Pfosser M.F., Baumann H.;
RT "Phylogeny and geographical differentiation of zucchini yellow mosaic virus
RT isolates (Potyviridae) based on molecular analysis of the coat protein and
RT part of the cytoplasmic inclusion protein genes";
RL Arch. Virol. 147(8):1599-1609(2002).
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FH Key Location/Qualifiers
FH
FT source 1. .1134
FT /country="Austria"
FT /db_xref="taxon:12232"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Zucchini yellow mosaic virus"
FT /isolate="Austria 11"
FT CDS <1. .940
FT /codon_start=2
FT /db_xref="GOA:Q8QXJ0"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:Q8QXJ0"
FT /product="polyprotein"
FT /protein_id="CAD12312.1"
FT /translation="YTDKGADTSELARYLQALHQDIFFEQGDTVMLQSGTQPTVADAGA
FT TKKNNEDDKGKNKDATGSGSGEKTMAAVTKDKDVNAGSHGKIVPRLSKITKKMSLPRVK
FT GNVILDIDHLLEYKPDQIELYNTRASHQQFASWFNQVKTEYDLNEQQMGVVMNGFMVWC
FT IENGTSPDINGVWVMMDGNEQVEYPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNAEA
FT PYMPRYGLLRNLRDRSLARYAFDFYEVNSKTPERAREAVAQMKAAALSNVSSRLFGLDG
FT NVATTSEDTERHTARDVNRNMHTLLGVNTMQ"
FT mat_peptide <1. .100
FT /product="NIb"
FT mat_peptide 101. .937
FT /product="coat protein"
FT 3'UTR 941. .1134
XX
SQ Sequence 1134 BP; 347 A; 232 C; 278 G; 276 T; 1 other;
aj420016 Length: 1134 19-DEC-2005 Type: N Check: 993 ..
1 atacactgac aagggagcng atacaagtga actggcacgt tatctacaag
51 ctctccacca agacatcttc tttgaacaag gagacactgt aatgctccaa
101 tcaggcactc agccaactgt ggcagacgct ggagccacaa agaaaaacaa
151 cgaagatgac aaagggaaaa acaaggatgc tacaggctcc ggctcaggtg
201 agaaaacaat ggcagctgtc acgaaggaca aggatgtaaa tgctggttct
251 catgggaaaa ttgtgccgcg tctttcgaag ataacaaaga agatgtcact
301 gccacgcgtg aaaggaaatg tgatactcga cattgatcac ttgctggagt
351 ataagccgga tcaaattgag ttatacaaca cacgagcgtc tcatcagcaa
401 ttcgcctctt ggttcaacca agttaaaact gaatatgatc tgaatgaaca
451 acagatggga gttgtaatga atggtttcat ggtttggtgc attgaaaatg
501 gcacgtcacc cgacattaac ggagtatggg ttatgatgga cggtaatgag
551 caggttgaat atcctttgaa accaatagtt gaaaatgcaa agccaacgct
601 gcgacaaata atgcatcact tttcagatgc agcggaggca tatatagaga
651 tgagaaatgc agaggcacca tacatgccga ggtatggttt gcttcgaaac
701 ttacgggata ggagtttggc acgatatgct ttcgacttct acgaagtcaa
751 ttccaaaact ccggagagag cccgcgaagc tgttgcgcag atgaaagcag
801 cagcccttag caatgtttct tcaaggttgt ttggccttga tggaaatgtt
851 gccaccacta gcgaagacac tgaacggcac actgcacgtg atgttaatag
901 gaacatgcac accttgctag gtgtgaatac aatgcagtaa agggtaggtc
951 gcctacctag gttatcgttt cgctgccgac gtaattctaa tatttaccgc
1001 tttatgtgat gtctttagat ttctagagtg ggcctcccac ctttaaagcg
1051 taaagtttat gttagttgtc caggagtgcc gtagtcctgt cggaagcttt
1101 agtgtgagcc tctcacgaat aaactcgaga ttta