Sequence of DPV Colombian datura virus
Colombian datura potyvirus partial gene for polyprotein, isolate Godollo, genomic RNA
ACC No: AJ437482
Dated: 2005-06-29 | Length: 1668 | CRC: 450344009
!!NA_SEQUENCE 1.0
ID CDA437482 standard; genomic RNA; VRL; 1668 BP.
XX
AC AJ437482;
XX
SV AJ437482.1
XX
DT 09-MAR-2002 (Rel. 71, Created)
DT 29-JUN-2005 (Rel. 84, Last updated, Version 2)
XX
DE Colombian datura potyvirus partial gene for polyprotein, isolate Godollo,
DE genomic RNA
XX
KW polyprotein.
XX
OS Colombian datura virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1668
RA Palkovics L.;
RT ;
RL Submitted (27-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL Palkovics L., Virology, Agricultural Biotechnology Center, Godollo
RL Szent-Gyorgyi A. u. 4., H-2100, HUNGARY.
XX
RN [2]
RA Salamon P., Palkovics L.;
RT "Colombian datura virus is a new pathogen in Hungary (In Hungarian)";
RL Kertesz. Szolesz. 51(8):13-13(2002).
XX
RN [3]
RA Salamon P., Palkovics L.;
RT "Occurrence of Colombian datura virus (CDV) in Brugmansia hybrids, Physalis
RT peruviana L. and Solanum muricatum Ait. in Hungary";
RL Acta Virol. 49(2):117-122(2005).
XX
RN [4]
RA Salamon P., Palkovics L.;
RT "Virus and virus diseases of cultivated and wild-growing solanaceous plants
RT in Hungary. 5. Ocurence, natural hosts and identification of Colombian
RT datura virus (CDV)";
RL Novenyvedelem 39(12):581-588(2003).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1668
FT /country="Hungary"
FT /db_xref="taxon:91613"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Colombian datura virus"
FT /clone="Br1"
FT /isolate="Godollo"
FT /specific_host="Brugmansia ssp."
FT CDS <1. .1429
FT /codon_start=2
FT /db_xref="GOA:Q8QME5"
FT /db_xref="InterPro:IPR001205"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="UniProt/TrEMBL:Q8QME5"
FT /product="polyprotein"
FT /protein_id="CAD26690.1"
FT /translation="STVVDSTLMVNIAMFYAMHSRDIPKESVRFYVNGDDLLIAIEPQY
FT EDELKHFQALFLELGLIYTFDDITKDRSDVEFMSHKAVLREGIYIPKLEPERIVSILEW
FT DRSGEPSHRLEAICASIIESWGYDELTKRIRMFYLWILEQAPYKQLAEEGRAPYLAETA
FT LRKLYLDAEPTESELLKYAGCIRGDYDDSLASEDIYLQADKVDAGSNTQAGKNQSKEKD
FT TSVVTTGERKDLVAKQDRDVNAGSSGTFSVPRIKAIPTKMNLPKIKNKQVISLDHLLNY
FT KPEQHDISNTRATHQQFEQWHNRVRDAYEVTDEQMQIILNGLMVWCIENGTSPNIHGVW
FT TMMDGEEQVEYALKPIIENAQPTFRQIMAHFSDLAEAYIEMRNRDRAYMPRYGLQRNLT
FT DMSLSRYAFDFYEVTPRTPTRAREAHMQMKAAAIRNNTTKLFGLDGNVSTAEEDTERHT
FT AQDVNRGMHTLLGVRQG"
FT mat_peptide <1. .604
FT /product="NIb polymerase"
FT mat_peptide 605. .1426
FT /product="CP, coat protein"
FT 3'UTR 1430. .1668
XX
SQ Sequence 1668 BP; 504 A; 336 C; 380 G; 448 T; 0 other;
AJ437482 Length: 1668 July 5, 2005 08:55 Type: N Check: 4275 ..
1 atctacagtc gttgacagca cactgatggt taacatagcc atgttttacg
51 ccatgcactc acgtgacatt ccgaaagagt ccgtgagatt ttatgttaat
101 ggagatgatc tgctcattgc tatagagcca cagtatgaag acgagttgaa
151 gcactttcaa gctttattct tagaactcgg tcttatttat acttttgatg
201 acattacaaa agaccgcagt gatgtggaat ttatgtcaca caaggctgtt
251 ctcagagaag gtatttacat acctaaactt gaaccagagc ggattgtttc
301 cattcttgaa tgggacagat caggagaacc atctcatcgg ctggaagcca
351 tctgtgcaag catcatagag tcgtggggct atgatgaact gactaagaga
401 atcagaatgt tttatctttg gattctcgaa caagcaccct acaaacaact
451 tgctgaagaa gggagagctc cttacctagc tgaaactgct ctgcgcaagt
501 tgtaccttga tgctgaaccc actgaatcgg aattgcttaa atatgcaggg
551 tgcatcagag gtgattatga tgatagcttg gcatccgaag atatatatct
601 ccaagctgat aaagttgatg ccggtagtaa cacacaagcc ggaaagaacc
651 agtcaaaaga aaaagacaca agtgttgtca cgactggaga gagaaaggat
701 cttgtcgcta aacaagatcg agatgtgaat gctggttcta gtggaacctt
751 tagtgtgcct cgcattaaag caattcctac taagatgaac ctacccaaga
801 tcaagaataa acaggttatt agtctggacc atctgctgaa ctacaaacca
851 gaacaacatg atatctcaaa cacaagggcc acacaccaac aatttgaaca
901 gtggcacaat cgtgtacgag atgcttatga agttactgat gaacagatgc
951 agataatctt gaatggatta atggtttggt gtatcgaaaa tggtacatca
1001 ccaaacatac atggtgtctg gactatgatg gatggggagg aacaggttga
1051 gtatgcatta aagcccatca ttgaaaatgc tcaacccaca tttcgccaaa
1101 taatggcgca ttttagcgat ctagcggagg cttatattga aatgaggaac
1151 agggatcgcg cctacatgcc gcgttacggg ctacagcgca atcttactga
1201 catgagtctg agccgctatg catttgactt ttacgaggtt actccgcgga
1251 cgccaacccg tgctcgtgaa gctcatatgc agatgaaagc tgcagcaatt
1301 cgaaacaaca caacgaagtt atttggtttg gatgggaatg tttcaactgc
1351 tgaagaggat accgaacgtc acacggcaca agacgttaac agaggtatgc
1401 acacattact tggtgtgcgt caaggttaga ggttatcttt gctttctgca
1451 cttttaatta ctatgtctat atgtaatatg tttaacactg ccactagtcg
1501 accgttttgt ctcgtgatta gtgaggttcg acctcgttca cattacagaa
1551 gggcgttagt cagtatttac atttcatatc ttagtatgta ctaaaagtgt
1601 ctctctacgt tcacctttca gtcgcagtga ggttatacct cggacacgga
1651 agtggttcat agagcgag