Sequence of DPV Eupatorium yellow vein mosaic virus
Eupatorium yellow vein virus-[SOJ3] complete genome, isolate Fukuoka-SOJ3
ACC No: AJ438937
Dated: 2005-04-15 | Length: 2778 | CRC: 618400054
!!NA_SEQUENCE 1.0
ID EYE438937 standard; circular genomic DNA; VRL; 2778 BP.
XX
AC AJ438937;
XX
SV AJ438937.1
XX
DT 06-JAN-2003 (Rel. 74, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE Eupatorium yellow vein virus-[SOJ3] complete genome, isolate Fukuoka-SOJ3
XX
KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein;
KW complete genome; replication enhancer protein;
KW replication-associated protein; transcriptional transactivator protein.
XX
OS Eupatorium yellow vein virus-[SOJ3]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2778
RA Stanley J.;
RT ;
RL Submitted (12-MAR-2002) to the EMBL/GenBank/DDBJ databases.
RL Stanley J., Department of Disease and Stress Biology, John Innes Centre,
RL Norwich Research Park, Colney, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN [2]
RX DOI; 10.1038/422831a.
RX MEDLINE; 22598129.
RX PUBMED; 12712190.
RA Saunders K., Bedford I.D., Yahara T., Stanley J.;
RT "The earliest recorded plant virus disease";
RL Nature 422(6934):831-831(2003).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2778
FT /country="Japan:Fukuoka Prefecture"
FT /db_xref="taxon:223277"
FT /mol_type="genomic DNA"
FT /virion
FT /organism="Eupatorium yellow vein virus-[SOJ3]"
FT /clone="pGEM-EYVVAS1"
FT /lab_host="Nicotiana benthamiana"
FT /specific_host="Eupatorium makinoi"
FT /isolate="Fukuoka-SOJ3"
FT CDS 137. .487
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProt/TrEMBL:Q8B3L4"
FT /gene="AV2"
FT /product="putative AV2 protein"
FT /protein_id="CAD27699.1"
FT /translation="MWDPLLNEFPETVHGFRCMLSIKYLQLVENTYSPDTVGRDLIRDL
FT ILVIRAKNYVEASCRYSDFHARLQGTSPSELRQPVCQPCECPHCPRHKQKEIMGSKAHV
FT PEAQDVQNVQKP"
FT CDS 297. .1070
FT /db_xref="GOA:Q8B3L3"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q8B3L3"
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="CAD27700.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYVSRANAPTVLVTNRRRSW
FT AQRPMFRKPRMYRMYRSPDIPKGCEGPCKVQSFEKKNDVGHSGTLLSVSDVTRGNGLTH
FT RSGKRFCIKSCYIIGKIWMDENIKTKNHTNTVMFWLVRDRRPLTTPYGFQEAFNMFDNE
FT PSTATIKQDLRDRLQVLHKFHATVTGGQYASKEQAVIKKFWKLNHHVTYNHQEQAKYEN
FT HTENALILYMASTHASNPVYATLKIRIYFYDSVQN"
FT CDS complement(1067. .1471)
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q8B3L2"
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="CAD27701.1"
FT /translation="MDSRTGTIITAAQAQSGAYIWTVPNPLYFKITRHDQRSFNRNQDI
FT ITIQIQFNHNLRSHLGLHKCFLIFKIWSRLHPQTWRFLRVFRTQVMNYLYSLGVISINN
FT VIRAVDHVLYNRLQGTMYVQTFHDIKYKIY"
FT CDS complement(1212. .1619)
FT /db_xref="GOA:Q8B3L1"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q8B3L1"
FT /gene="AC2"
FT /product="transcriptional transactivator protein"
FT /protein_id="CAD27702.1"
FT /translation="MQPSSPSTAHSTQVPIKVQHRIAKKKKNRRRRIDLNCGCSIYVGL
FT DCANHGFTHRDHHYCSSGAEWRVYLDGTKSPLFQNHQARSTVIQQESRHHNNTDTVQPQ
FT PKIPPGFAQVFPHFQDLESLTSSDVAFLEGL"
FT CDS complement(1519. .2607)
FT /db_xref="GOA:Q8B3L0"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q8B3L0"
FT /gene="AC1"
FT /product="replication-associated protein"
FT /protein_id="CAD27703.1"
FT /translation="MAPPKRFRINSKNYFLTYPQCSLTIEEALSQLRNIQTPVNKKFIR
FT VCQEQHEDGSPHLHSLLQFEGKFQCTNPRFFDLVSPNRSTHFHCNIQGAKSSSDVKSYI
FT EKDGQFSDWGEFQIDGRSARGGQQSANDAYAQAINTGSKSEALRVIKELAPMDYVLQFH
FT NLNSNLDRIFAPPLEVFVCPFTASSFDQVPEELEEWAAENVKSSAARPWRPISIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVVDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEFLDEEKNSALKAWAVKNATFVTLYSPL
FT YSGTHQSPAQDSQEEEEPQEED"
FT CDS complement(2148. .2456)
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q8B3K9"
FT /gene="AC4"
FT /product="putative AC4 protein"
FT /protein_id="CAD27704.1"
FT /translation="MKTGLLTCIPFFNSKGNSNAQIRDSSTWYPQIGQHISIATFRELN
FT PAPTSSPTSRRTVNSPTGENSRSMGEVQEVDSNQPMTLTPRQLTLEVSQRLLGSSRN"
XX
SQ Sequence 2778 BP; 736 A; 587 C; 610 G; 845 T; 0 other;
AJ438937 Length: 2778 April 19, 2005 08:53 Type: N Check: 1115 ..
1 accggatggc cgccgatttt tttaatgggc cctccctgtc tgctgatcct
51 gaccatcctt tgaagcctaa ttaaatactt gttccctaag tcttttccgt
101 atttaaatac gtatgcccta gctttatacg tgtataatgt gggatccatt
151 gcttaacgaa tttcctgaaa ccgtacacgg ttttaggtgt atgctttcaa
201 ttaaatacct acagcttgta gaaaatacgt attctccaga caccgtaggt
251 cgtgatctta tacgtgacct tatacttgtc atacgagcta agaactatgt
301 cgaagcgtcc tgccgatata gtgatttcca cgcccgcctc caaggtacgt
351 cgccgtctga acttcgacag cccgtatgtc agccgtgcga atgcccccac
401 tgtcctcgtc acaaacagaa ggagatcatg ggctcaaagg cccatgttcc
451 ggaagcccag gatgtacaga atgtacagaa gccctgatat ccccaagggc
501 tgtgaaggcc cgtgtaaggt ccagtcattt gagaagaaaa atgatgttgg
551 tcattctggt actttgttaa gtgtgtccga tgttactcgt ggtaacggtc
601 ttactcatcg atctgggaag agattttgta ttaaatcttg ttacattatt
651 ggtaaaatct ggatggatga aaacatcaag actaaaaacc acactaacac
701 tgtcatgttt tggttagtta gagatagacg tccccttacg actccgtatg
751 gatttcaaga ggctttcaac atgtttgata acgaacccag tactgcaaca
801 atcaagcagg accttagaga tcgtctgcag gtgttacaca agtttcatgc
851 cactgtcacc ggtggacagt atgcgtccaa ggaacaggct gtgatcaaga
901 agttctggaa gctcaatcat catgtgactt acaatcatca agagcaggct
951 aaatatgaga accatactga gaacgcatta atattgtata tggctagtac
1001 tcatgccagt aatcccgtgt atgcaacctt gaaaatcagg atctatttct
1051 atgattctgt tcagaattaa taaattttat attttatatc atgaaatgtc
1101 tgtacataca ttgttccttg caatctatta tacaatacat gatcaactgc
1151 cctaattaca ttattaattg aaatcacacc caaactatat aagtagttca
1201 tcacttgggt cctaaagacc ctcaagaaac gccacgtctg aggatgtaag
1251 cgactccaga tcttgaaaat gaggaaacac ttgtgcaaac ccaggtggga
1301 tcttaggttg tggttgaact gtatctgtat tgttatgatg tcttgattcc
1351 tgttgaatga ccgttgatcg tgcctggtga ttttgaaata gaggggattt
1401 ggtaccgtcc agatatacgc gccactctgc gcctgagctg cagtaatgat
1451 ggtccctgtg cgtgaatcca tggtttgcac agtctagtcc cacgtagata
1501 gaacacccgc agttcagatc aatcctcctc ctgcggttct tcttcttctt
1551 ggctatcctg tgctggactt tgatgggtac ctgagtagag tgggctgtag
1601 agggtgacga aggttgcatt cttaactgcc caggctttta atgcggaatt
1651 cttttcttcg tccagaaatt ccgtatatga agacgttggt cctggattgc
1701 agaggaagat tgttgggatt ccacctttaa tttgaattgg tttcccgtac
1751 ttcgtgttgc tttgccagtc cctttgggcc cccatgaatt ctttaaaatg
1801 ctttaggtag tgggggtcta catcatcaac gacgttgtac caggcgtcgt
1851 tgctgtagat ttttggactc agatccagat gaccacatag gtagttatga
1901 ggacctaatg acctagccca cattgtcttg cctgtcctac tatcaccctc
1951 tatgacaata ctaatcggtc tccatggccg cgcagcggaa gactttacgt
2001 tttctgcagc ccattcctca agttcttcag gaacttgatc aaatgaagaa
2051 gctgtgaaag gacaaacaaa aacctccaac ggaggagcaa aaattctatc
2101 taaattacta tttaaattat ggaactgtaa tacataatcc ataggggcta
2151 gttccttgat gaccctaaga gcctctgact tacttccagt gttaattgcc
2201 tgggcgtaag cgtcattggc tgattgctgt ccacctcttg cacttctccc
2251 atcgatctgg aattctcccc agtcggagaa ttgaccgtcc ttctcgatgt
2301 aggacttgac gtcggagctg gatttagctc cctgaatgtt gcaatggaaa
2351 tgtgttgacc tatttgggga taccaggtcg aagaatctcg gatttgtgca
2401 ttggaatttc ccttcgaatt gaagaaggga atgcaagtga ggagacccgt
2451 cttcatgttg ttcttgacaa acccttatga attttttgtt tactggtgtt
2501 tggatatttc gtaattggga aagtgcttct tcgatcgtta atgagcattg
2551 aggataggtg aggaaataat ttttgctatt tattcgaaat cgttttggtg
2601 gtgccatatt tactaatatg cccttgtaca ccgattggga gagaaaactt
2651 ctgtgccatg tatcggtgta atggggtaca atatataggt gtacaccaaa
2701 tggcataatt gtaaattatg aaagtaggag cgtgcttttg aaattcaaaa
2751 ttgccaaagc ggccatccgt ttaatatt