Sequence of DPV Sweet potato virus G

Sweet potato virus G partial NIb/CP gene for nuclear inclusion protein b/ coat protein, genomic RNA, isolate Egypt1

ACC No: AJ515380

Dated: 2003-12-04 | Length: 1784 | CRC: -102724673

                !!NA_SEQUENCE 1.0
ID   SPO515380  standard; genomic RNA; VRL; 1784 BP.
XX
AC   AJ515380;
XX
SV   AJ515380.1
XX
DT   08-NOV-2002 (Rel. 73, Created)
DT   04-DEC-2003 (Rel. 78, Last updated, Version 3)
XX
DE   Sweet potato virus G partial NIb/CP gene for nuclear inclusion protein b/
DE   coat protein, genomic RNA, isolate Egypt1
XX
KW   NIb/CP gene; nuclear inclusion protein b/coat protein.
XX
OS   Sweet potato G virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1784
RA   Kreuze J.F.;
RT   ;
RL   Submitted (06-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Kreuze J.F., Plant Biology, Swedish Univ. of Agricultural Sciences, BOX
RL   7080, 75007 Uppsala, SWEDEN.
XX
RN   [2]
RA   Ishak J.A., Kreuze J.F., Johansson A., Mukasa S.B., Tairo F.,
RA   Abo El Abbas F.M., Volkonen J.P.T.;
RT   "Some molecular characteristics of three viruses from SPVD-affected sweet
RT   potato plants in Egypt";
RL   Arch. Virol. 148(12):2449-2460(2003).
XX
DR   GOA; Q8AYT4.
DR   SPTREMBL; Q8AYT4; Q8AYT4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1784
FT                   /country="Egypt:Cairo"
FT                   /db_xref="taxon:46619"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Sweet potato G virus"
FT                   /isolate="Egypt1"
FT                   /specific_host="Ipomoea batatas"
FT   CDS             <1. .1698
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8AYT4"
FT                   /db_xref="SPTREMBL:Q8AYT4"
FT                   /gene="NIb/CP"
FT                   /product="nuclear inclusion protein b/coat protein"
FT                   /function="involved in encapsidation"
FT                   /protein_id="CAD56386.1"
FT                   /translation="QPSTVVDNTLMVVLAMTYSLEKVGIKGEEQDEVCVYFANGDDLLI
FT                   AIEPTHEWVLDTLQVSFKELGLNYDFSTRCKERGDLWFMSHQGIERDGTFIPKLEPERI
FT                   VSILEWDRSHEPVHRLEAICAAMVEAWGYDELLARIRRFYAWILDQAPYSELAHQGKAP
FT                   YIAESALKTLYTNIAPTNMELSEYARVLSQMYEDSLTNFEDNNVHHQSAEEIYDAGKTG
FT                   NTGRGRGRGTVPPPPPPPGAPRTGDLPPAVQTGPLPPGAASKPPIIEEIPQPESPRTKA
FT                   LREARGKAPATIPDSRGVDTSQIPSFTPGRDQTMTPTPQRTSTGVRDRDVNAGTVGTFI
FT                   VPRLQITHSKKRAPMANGRIVINLDHLTIYDPEQTNLSNTRATQEQFNAWYEGVREDYG
FT                   VNDEQMGILLNGLMVWCIENGTSPNINGMWVMMDGDEQVTYPIKPLLDHAVPTFRQIMT
FT                   HFSDIAEAYIEKRNRIKAYMPRYGLQRNLTDMSLARYAFDFYELHSNTPVRAREAHMQM
FT                   KAAALKNAQNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ"
XX
SQ   Sequence 1784 BP; 581 A; 363 C; 427 G; 413 T; 0 other;

AJ515380  Length: 1784  December 9, 2003 08:57  Type: N  Check: 7133  ..

       1  caaccttcaa cagttgttga caacacactc atggttgtac tagctatgac
      51  gtattcactt gagaaagtgg gaatcaaagg tgaggagcaa gacgaggttt
     101  gcgtctactt cgctaatggt gacgatttac tcatagcaat tgaaccaacc
     151  catgagtggg tacttgacac attgcaagta agcttcaaag aactgggact
     201  taattatgac ttttcgacaa gatgcaaaga gagaggtgat ctttggttta
     251  tgtctcatca aggaatagaa agagatggca cattcatacc taaacttgaa
     301  ccagagagga tcgtctcaat tttagaatgg gataggtcac atgaaccagt
     351  tcacaggcta gaggctatat gtgccgcaat ggttgaggct tggggttatg
     401  atgaactact cgcaaggatt agaagatttt acgcttggat ccttgatcaa
     451  gcaccatata gtgaattggc gcatcaagga aaagcaccct acatagctga
     501  gtcagctctg aagacactat acacaaatat agctccaaca aacatggaac
     551  tatcagagta tgcacgagtt ctatcacaaa tgtatgaaga ctctctgaca
     601  aattttgagg ataacaacgt gcatcatcag tctgctgaag agatatacga
     651  cgcaggaaaa acaggaaaca caggaagggg aagaggacga ggtactgtgc
     701  ctccgccgcc gccaccccct ggggcaccaa gaacaggtga cctgcctcca
     751  gcagtgcaga caggaccatt accaccaggt gcagcctcaa aaccacctat
     801  cattgaggaa attccgcagc cagagtcacc gagaacgaag gcattgcggg
     851  aagcaagagg gaaagctcca gcaacaattc cagatagtag aggggttgat
     901  acatcacaaa taccgagttt cacaccaggt agagatcaaa caatgacacc
     951  aacccctcaa agaacaagca ctggagtgag agatagagat gtgaatgctg
    1001  gtacggttgg aacttttata gtgccacggc tccagataac acatagtaag
    1051  aaaagagcac caatggcaaa tggaagaata gtaatcaatc ttgaccactt
    1101  gacaatctat gaccctgaac aaacaaatct ttcaaatact cgagcaacac
    1151  aggaacaatt taatgcttgg tacgagggtg tcagggaaga ttatggagtg
    1201  aatgatgagc aaatggggat attgctcaac gggttaatgg tttggtgcat
    1251  cgagaacgga acatccccga atattaatgg aatgtgggtc atgatggatg
    1301  gtgatgaaca agttacatat ccaataaaac ctctattgga tcatgctgtc
    1351  cccacattta ggcagataat gacacacttt agcgacatcg ctgaagcgta
    1401  tattgaaaag cgcaatagga tcaaggcata catgccgagg tatggtctac
    1451  aacgaaactt gactgatatg agtcttgcgc gatatgcgtt cgatttctat
    1501  gagctgcact cgaacactcc tgttcgggcc agagaggcac atatgcaaat
    1551  gaaagcagca gcacttaaga acgcacaaaa tcggttgttt ggtttggacg
    1601  gaaacgtctc cacgcaggaa gaagatacgg agaggcacac aacgactgat
    1651  gttacaagga atatacataa cctcttgggt atgaggggtg tgcagtaaac
    1701  aatatattgc tcgtaccttt taatttcagt ttcgccttca gtgttattta
    1751  aattcgtgtt tttcagtccc gaagggcgat tgtt