Sequence of DPV Cymbidium mosaic virus

Cymbidium mosaic virus CP gene for coat protein, genomic RNA

ACC No: AJ564562

Dated: 2006-05-19 | Length: 672 | CRC: -1233308652

                
ID   CMO564562  standard; genomic RNA; VRL; 672 BP.
XX
AC   AJ564562;
XX
SV   AJ564562.5
XX
DT   03-JUN-2003 (Rel. 76, Created)
DT   19-MAY-2006 (Rel. 87, Last updated, Version 8)
XX
DE   Cymbidium mosaic virus CP gene for coat protein, genomic RNA
XX
KW   coat protein; CP gene.
XX
OS   Cymbidium mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RC   revised by [3]
RA   Sherpa A.R.;
RT   ;
RL   Submitted (16-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Sherpa A.R., Floriculture Division, IHBT(CSIR), Palampur, 176061, INDIA.
XX
RN   [3]
RP   1-672
RA   Sherpa A.R.;
RT   ;
RL   Submitted (16-MAY-2005) to the EMBL/GenBank/DDBJ databases.
RL   Sherpa A.R., Floriculture Division, IHBT(CSIR), Palampur, 176061, INDIA.
XX
RN   [4]
RA   Sherpa A.R., Hallan V., Pathak P., Zaidi A.A.;
RT   "Characterization of the Coat Protein Gene of Cymbidium mosaic virus
RT   Isolates from India";
RL   J. Phytopathol. 154(5):275-280(2006).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Cymbidium mosaic virus"
FT                   /specific_host="Phaius tancarvilleae"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Himachal Pradesh"
FT                   /virion
FT                   /db_xref="taxon:12178"
FT   CDS             1. .>668
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q7TAW3"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TAW3"
FT                   /protein_id="CAD92093.5"
FT                   /translation="MGESTPAPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGFPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQHRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHAESTNTLYSLPAPPT
FT                   "
XX
SQ   Sequence 672 BP; 132 A; 238 C; 158 G; 144 T; 0 other;

aj564562 Length: 672  19-MAY-2006  Type: N  Check: 5020  ..

       1  atgggagagt ccactccagc tccagctgcc acttactccg ctgccgaccc
      51  cacttctgca cccaagttgg ctgacctggc tgccattaag tactcacctg
     101  tcacctcctc catcgccacc cccgaagaaa tcaaggccat aacccaattg
     151  tgggttaaca atcttggctt ccccgccgac acagtaggta ccgcggccat
     201  tgatctggct cgcgcctacg ctgacgtcgg ggcgtccaag agtgctaccc
     251  tgctcggttt ctgccctacg aaacctgatg tccgtcgcgc cgctcttgcc
     301  gcgcagatct tcgtggccaa cgtcaccccc cgccagtttt gcgcttacta
     351  cgcaaaagtg gtgtggaatc tgatgctggc tactaacgat ccgcccgcca
     401  actgggccaa ggctggtttc caggaggata cccggtttgc cgcctttgac
     451  ttcttcgatg ccgtcgattc cactgccgcg ctggagcctg ctgaatggca
     501  gcaccgccct actgaccgtg aacgtgctgc gcactcgatc gggaagtacg
     551  gcgcccttgc ccgtcagcgt atccaaaacg gcaacctcat caccaacatt
     601  gccgaggtca ccaagggcca tgctgaatcc accaacactc tctattctct
     651  gcctgcaccc cctactgaat aa