Sequence of DPV Lily symptomless virus
Lily symptomless virus genes for TGBp2, TGBp3, coat protein and nucleic acid binding protein genomic RNA, isolate Si
ACC No: AJ564641
Dated: 2003-12-04 | Length: 1796 | CRC: 437397315
!!NA_SEQUENCE 1.0
ID LSY564641 standard; genomic RNA; VRL; 1796 BP.
XX
AC AJ564641;
XX
SV AJ564641.1
XX
DT 04-DEC-2003 (Rel. 78, Created)
DT 04-DEC-2003 (Rel. 78, Last updated, Version 1)
XX
DE Lily symptomless virus genes for TGBp2, TGBp3, coat protein and nucleic
DE acid binding protein genomic RNA, isolate Si
XX
KW coat protein; nucleic acid binding protein; ORF3; ORF4; ORF5; ORF6; TGBp2;
KW TGBp3.
XX
OS Lily symptomless virus (LSV)
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Carlavirus.
XX
RN [1]
RP 1-1796
RA Adams M.J.;
RT ;
RL Submitted (28-MAY-2003) to the EMBL/GenBank/DDBJ databases.
RL Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN [2]
RX PUBMED; 14648295.
RA Zheng H.Y., Chen J., Zhao M.F., Lin L., Chen J.P., ntoniw J.F., Adams M.J.;
RT "Occurrence and sequences of Lily mottle virus and Lily symptomless virus
RT in plants grown from imported bulbs in Zhejiang province, China";
RL Arch. Virol. 148(12):2419-2428(2003).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1796
FT /country="China:Zhejiang, Hangzhou"
FT /db_xref="taxon:12173"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Lily symptomless virus"
FT /isolate="Si"
FT /specific_host="Lilium sp. cv. Siberia"
FT CDS 1. .321
FT /product="TGBp2"
FT /gene="ORF3"
FT /protein_id="CAD92126.1"
FT /translation="MPLTPPPDYTRVYTALAIGASIAFFTGLITRNTLPSVGDLQHNLP
FT HGGRYRDGTKSVEYCGPRKLNSVESGSRWTFQPWLLVIVLVALIIALGRQGHNCRACGR
FT SH"
FT CDS 303. .497
FT /product="TGBp3"
FT /gene="ORF4"
FT /protein_id="CAD92127.1"
FT /translation="MRSVALTLCAIIAGYLLVSNLQNVFSPEVCTLVITGESIRINGCN
FT LSPAHFRAISHLKVLQIHL"
FT CDS 543. .1418
FT /gene="ORF5"
FT /product="coat protein"
FT /protein_id="CAD92128.1"
FT /translation="MQSRPAQESGSASETPARGRPTPSDAPRDEPTNYNNNAESLLEQR
FT LTRLIEKLNAEKHNSNLRNVAFEIGRPSLEPTSAMRRNPANPYGRFSIDELFKMKVGVV
FT SNNMATTEQMAKIASDIAGLGVPTEHVASVILQMVIMCACVSSSAFLDPEGSIEFENGA
FT VPVDSITAIMKKHAGLRKVCRLYAPIVWNSMLVRNQPPADWQAMGFQYNTRFAAFDTFD
FT YVTNQAAIQPVEGIIRRPTSAEVIAHNAHKQLALDRSNRNERLGSLETEYTGGVQGAEI
FT VRNHRYANNG"
FT CDS 1411. .1749
FT /gene="ORF6"
FT /product="nucleic acid binding protein"
FT /protein_id="CAD92129.1"
FT /translation="MDEALKRRTTIVLCLLSAFPRDICRDILRRTSSHIVGLGRSRYAR
FT RRRALQIGRCERCYRVYPPVCGSKCDNKTCWPGLSINTNVANYIDHGVTEVIPWISPHR
FT GQFYLRPK"
XX
SQ Sequence 1796 BP; 466 A; 464 C; 441 G; 425 T; 0 other;
AJ564641 Length: 1796 June 22, 2004 14:38 Type: N Check: 9431 ..
1 atgcctctta cgccgcctcc tgattataca agagtttaca ctgcactcgc
51 cattggtgct tccattgcat ttttcactgg attgatcacg cgtaacacac
101 taccttccgt tggtgatttg cagcacaact tgccccacgg tgggaggtac
151 cgggacggca caaaaagtgt agagtactgc ggcccccgaa aactgaattc
201 tgtcgagagt ggtagccgct ggaccttcca gccttggctc ttggtcatcg
251 tgcttgttgc actgatcatc gctcttggtc gacagggaca taactgtcgg
301 gcatgcggtc ggtcgcacta acactttgcg ctatcatcgc cggctatttg
351 ctcgtgtcta acttgcaaaa cgtattctcg cccgaggtct gcactttagt
401 cattactggt gagtccatcc gtataaacgg ctgtaacctt agtccagcac
451 atttccgagc aatctcacac ttgaaagtgc tacaaattca cctttaggtt
501 tacaggcagg cggacgatta gactctcact tgttaccgca agatgcaatc
551 aagaccagca caagaatccg gctctgcaag cgagacccct gcacgtggca
601 ggcccacacc cagtgatgca ccaagagacg agcccaccaa ttacaataat
651 aacgccgagt cactgttaga gcaacgacta acccggctga tcgagaagct
701 caatgctgaa aagcacaatt ccaatctgcg aaatgtggct ttcgagatcg
751 ggaggccctc gctggaaccc acgagtgcca tgcgaaggaa ccctgcgaac
801 ccctacggga gattctcaat tgacgaactc ttcaagatga aggttggcgt
851 cgtatctaac aacatggcaa ccactgaaca aatggccaag atagcgtcag
901 acatcgcagg gcttggggta ccaacggagc acgtcgcatc agtaatattg
951 caaatggtca tcatgtgtgc ttgcgtgagc agttcggcgt tccttgaccc
1001 tgagggcagc attgagtttg agaatggagc ggtgcccgtc gactccatca
1051 ctgcgatcat gaagaagcac gctggactgc ggaaagtctg ccggctctat
1101 gcccctatcg tgtggaacag catgcttgtg cgaaatcaac caccagctga
1151 ttggcaagct atgggcttcc agtacaacac gcggttcgca gcttttgaca
1201 ccttcgacta cgtgactaac caggcggcta tccaacctgt cgaggggatc
1251 atcaggcgac ccacttctgc tgaggtcatt gcccacaacg cgcacaagca
1301 attagccctg gataggtcaa accgcaatga gcgtctgggg agcctggaaa
1351 ccgaatacac cggtggagta caaggagctg aaatcgtccg aaatcatcga
1401 tacgcaaata atggatgaag cattgaagcg acgaactacc atagtgttgt
1451 gtttgctttc tgcatttccg cgtgatattt gccgcgatat attgcggcgc
1501 acttctagtc acattgttgg gctcggaaga tctaggtatg ctagacgacg
1551 ccgagctctc caaattggca ggtgtgagag gtgttatcga gtgtatccac
1601 ctgtctgtgg atctaagtgt gacaataaga cctgctggcc aggcctatct
1651 ataaatacca acgtggccaa ctatatagat catggagtaa ccgaggtgat
1701 accatggatc tcaccacatc gtggccagtt ctacctaaga cctaaataat
1751 tttaagggta aaactataaa aaaaatttgt ttttaaatat tttagc