Sequence of DPV Tobacco curly shoot alphasatellite
Tobacco curly shoot virus associated DNA 1 rep gene for replication-associated protein
ACC No: AJ579345
Dated: 2004-08-18 | Length: 1367 | CRC: 2110111395
!!NA_SEQUENCE 1.0
ID TCU579345 standard; circular genomic DNA; VRL; 1367 BP.
XX
AC AJ579345;
XX
SV AJ579345.1
XX
DT 30-JUL-2003 (Rel. 76, Created)
DT 18-AUG-2004 (Rel. 80, Last updated, Version 2)
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DE Tobacco curly shoot virus associated DNA 1 rep gene for
DE replication-associated protein
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KW rep gene; replication-associated protein.
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OS Tobacco curly shoot virus associated DNA 1
OC Viruses; Satellites; Satellite Nucleic Acids;
OC Begomovirus-associated DNA 1-like sequences.
XX
RN [1]
RP 1-1367
RA Zhou X.;
RT ;
RL Submitted (29-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Institute of Biotechnology, Zhejiang University, No.268, Kaixuan
RL Road, Hangzhou, 310029, CHINA.
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RN [2]
RA Xie Y., Wu P., Tao X., Zhou X.;
RT "Identification of novel nanovirus-like DNA molecules associated with
RT Tobacco curly shoot virus isolates containing satellite DNA";
RL Prog. Nat. Sci. 14(8):689-693(2004).
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FH Key Location/Qualifiers
FH
FT source 1. .1367
FT /country="China:Yunnan"
FT /db_xref="taxon:240556"
FT /mol_type="genomic DNA"
FT /virion
FT /organism="Tobacco curly shoot virus associated DNA 1"
FT /isolate="Y35"
FT /isolation_source="tobacco"
FT /lab_host="Nicotiana benthamiana"
FT CDS 69. .1016
FT /db_xref="UniProt/TrEMBL:Q7T7M9"
FT /gene="rep"
FT /product="replication-associated protein"
FT /function="initiation of rolling circle replication"
FT /protein_id="CAE18121.1"
FT /translation="MPSITSVFWCFTLFFASSSAPDLVPVFENTHVSYACWQEEESPTT
FT RRRHLQGYLQLKGKRTLNQVKAIFGDLNPHLEKQRARKTDEACDYCMKEETRVSGPFEF
FT GDYCPSGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKLAEEEFQGTVAEIQISNLKSW
FT QLRLKTLLDRAPDDRTIFWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIG
FT CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLVNCIHVLVMSNFLPDF
FT EKISSDRVHVIPCIPCGVCLKHHLGEIKCDEYLD"
XX
SQ Sequence 1367 BP; 403 A; 259 C; 308 G; 397 T; 0 other;
AJ579345 Length: 1367 August 24, 2004 08:29 Type: N Check: 5441 ..
1 acccagcctc ggcacccgct ccttggaacc ctcgtgcttt ccgcgtgctc
51 tctctcttct tcacagaaat gccttcaatt acctctgtct tctggtgttt
101 caccctcttc ttcgcttcct cctctgctcc cgacctcgtt cccgtgtttg
151 agaacactca cgttagttac gcctgctggc aagaggaaga gtctcccacg
201 actcgacgtc gccacctgca ggggtatctc caattgaagg gtaagaggac
251 tctgaaccag gtgaaggcta tatttgggga tctgaatccc catcttgaga
301 aacagcgagc tcgtaagaca gacgaagctt gcgactattg tatgaaagag
351 gaaactaggg tttccggtcc ctttgaattt ggggattatt gccctagtgg
401 ttctcataaa cgccggcaaa gggaaagtgt aattcgaagt ccggtgagaa
451 tggctgaaga aaatccgtcc gttttccgac gagtcaaggc taagcttgcg
501 gaggaagaat tccagggtac tgtagctgaa attcaaattt caaatttgaa
551 atcttggcaa ctgcgcctga agacgctcct cgacagggcc ccagatgacc
601 gcactatctt ctgggtttat ggtcccactg gtggggaagg aaaatcaacc
651 tttgccagag atctgtacag aagtgggtcc tggttttata cacgtggagg
701 atctgctgat aatgttagtt atcagtatat aggatgctta ggaaataata
751 ttgtatttga tatccctcgt gataagaagg attatcttca atacagttta
801 atagagatgt ttaaggatag gttaatagtt agtaataagt atgagccttt
851 aatggcccct ttagttaatt gtattcatgt tttagttatg tctaattttc
901 tccctgattt tgagaagatt agtagtgata gagtccatgt aatcccttgt
951 attccttgtg gtgtttgtct taagcatcat cttggtgaaa taaaatgcga
1001 cgagtatttg gactaaatac gagtataaat acgttaattt tgcttcttta
1051 aaaaaagaag gaatgaaatg aaaaaaaaat aaacatacaa gcccaataat
1101 acaattcaat tgagaaaacc ccggcccgca ggggcaatgt ctttgatgca
1151 ggcccaaata aataaaatta acttgaataa agaaaaggga aaaaaataaa
1201 taaagtatta taaaaacgac gtcgtatgag taagtggggg attttttgta
1251 tattataaaa gttagaggga ctaaaagtgt caatatgaag gttcttaggt
1301 ccttatgagt gcaattatta gggttcctag gatataaata acacgtcacc
1351 gaggctggta tagtatt