Sequence of DPV Watermelon mosaic virus

Watermelon mosaic virus partial gene for polyprotein encoding coat protein CP, genomic RNA, isolate BAR99.4

ACC No: AJ579495

Dated: 2003-10-30 | Length: 873 | CRC: -1768628453

                !!NA_SEQUENCE 1.0
ID   WMO579495  standard; genomic RNA; VRL; 873 BP.
XX
AC   AJ579495;
XX
SV   AJ579495.1
XX
DT   30-OCT-2003 (Rel. 77, Created)
DT   30-OCT-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Watermelon mosaic virus partial gene for polyprotein encoding coat protein
DE   CP, genomic RNA, isolate BAR99.4
XX
KW   coat protein CP; polyprotein.
XX
OS   Watermelon mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-873
RA   Fraile A.;
RT   ;
RL   Submitted (17-JUL-2003) to the EMBL/GenBank/DDBJ databases.
RL   Fraile A., Biotecnologia, E.T.S.Ingenieros Agronomos, Ciudad Universitaria,
RL   28040-Madrid, SPAIN.
XX
RN   [2]
RA   Moreno I.M., Malpica J.M., Diaz-Pendon J.A., Moriones E., Fraile A.,
RA   Garcia-Arenal F.;
RT   "Variability and genetic structure of the population of Watermelon mosaic
RT   virus infecting melon in Spain";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .873
FT                   /country="Spain"
FT                   /db_xref="taxon:146500"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Watermelon mosaic virus"
FT                   /isolate="BAR99.4"
FT                   /isolation_source="Cucumis melo"
FT   CDS             <1. .>873
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="CAE18418.1"
FT                   /translation="DGCCESVSLQSGKEAVENLDAGKDSKKDTSGKGDKPQNSQTGQGS
FT                   KEQTKTGTVSKDVNVGSKGKEVPRLQKITKKMNLPTVGGKIILSLDHLLEYKPNQVDLF
FT                   NTRATKTQFGSWYSAVKVEYDLNDEQMGVIMNGFMVWCIDNGTSPDVNGVWVMMDGEEQ
FT                   VEYPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSESPYMPRYGLLRNLRDRELARYA
FT                   FDFYEVTSKTPNRAREAIAQMKAAALAGINSRLFGLDGNISTNSENTERHTARDVNQNM
FT                   HTLLGMGPPQ"
FT   mat_peptide     31. .873
FT                   /product="coat protein CP"
XX
SQ   Sequence 873 BP; 307 A; 149 C; 212 G; 205 T; 0 other;

AJ579495  Length: 873  November 11, 2003 09:13  Type: N  Check: 7040  ..

       1  gatggttgct gtgaatcagt gtctctgcaa tcaggaaaag aagcagtaga
      51  aaatttggat gcagggaagg actcaaagaa ggacaccagt ggcaaagggg
     101  ataagccaca aaactcgcaa actggtcaag gtagcaaaga acagacaaaa
     151  actggcacag tcagcaaaga tgtgaatgtt ggatcgaaag gaaaagaagt
     201  cccacgacta caaaagataa caaagaaaat gaaccttcca acagttggtg
     251  ggaaaatcat tcttagctta gatcatttgc tcgagtacaa acctaatcaa
     301  gttgatctgt ttaacactcg agcaacaaaa acacagtttg ggtcatggta
     351  cagcgcagtt aaagttgaat atgatcttaa cgatgagcaa atgggtgtga
     401  ttatgaatgg ttttatggtt tggtgtatcg ataacggtac atctccagat
     451  gtcaatggag tttgggtgat gatggatggg gaagagcaag ttgagtatcc
     501  attaaagcca attgttgaaa atgcgaaacc aactttaaga caaatcatgc
     551  accatttctc agacgcggca gaagcatata ttgaaatgag aaactctgaa
     601  agtccgtata tgcctagata cggactatta agaaatttga gagacaggga
     651  attagcacgc tatgcttttg acttttatga ggttacttcc aaaacaccta
     701  atagggcaag agaagcaata gcacaaatga aggccgcagc tctcgcggga
     751  attaacagca ggttatttgg gcttgatggt aatatctcga ccaattccga
     801  aaatactgaa aggcacactg caagggacgt gaatcagaat atgcatactt
     851  tgttaggtat gggtccaccg cag