Sequence of DPV Chrysanthemum virus B

Chrysanthemum virus B, cp gene for coat protein, isolate Hyderabad (AP), genomic RNA

ACC No: AJ580954

Dated: 2007-01-23 | Length: 948 | CRC: -1399352696

                
ID   AJ580954; SV 1; linear; genomic RNA; STD; VRL; 948 BP.
XX
AC   AJ580954;
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DT   28-AUG-2003 (Rel. 77, Created)
DT   23-JAN-2007 (Rel. 90, Last updated, Version 2)
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DE   Chrysanthemum virus B, cp gene for coat protein, isolate Hyderabad (AP),
DE   genomic RNA
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KW   coat protein; cp gene.
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OS   Chrysanthemum virus B
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Carlavirus.
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RN   [1]
RP   1-948
RA   Singh L.;
RT   ;
RL   Submitted (23-AUG-2003) to the EMBL/GenBank/DDBJ databases.
RL   Singh L., Floriculture, Inst. of Himalayan Biores. Tech., P. B. No. 6
RL   Palampur, Himachal Pradesh -176 061, INDIA.
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RN   [3]
RA   Singh L., Hallan V., Jabeen N., Singh A.K., Ram R., Martin D.P.,
RA   Zaidi A.A.;
RT   "Coat protein gene diversity among Chrysanthemum virus B isolates from
RT   India";
RL   Arch. Virol. 152(2):405-413(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .948
FT                   /organism="Chrysanthemum virus B"
FT                   /isolate="Hyderabad (AP)"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Hyderabad"
FT                   /virion
FT                   /db_xref="taxon:12165"
FT   CDS             1. .948
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q70HV7"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR001920"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:Q70HV7"
FT                   /protein_id="CAE45720.1"
FT                   /translation="MPPKPAPGDNEGNASGFTPTPPPPPPARTAEEARSRLAEMERERE
FT                   QEQLLDEMNSDTTTEDARNISRLTQLAALLRREQTNVHVTNMALEIGRPALQPPPSMRG
FT                   DPTNMYSQVSTDFLWKIKPPRISNNMATSEDMVKIQVALEGLGVPTESVKEVIIRLVLN
FT                   CANTSSSVYQDPKGVIEWDGGAIIADDVVGVITEHSTLRKVCRLYAAVAWNYMHLQQTP
FT                   PSDWSAMGFHPNVKYAAFDFFDHVENGAAIRPSGGIVPKPTRAEYVAYNTYKMLALNKA
FT                   NNNDTFGNFDSAITGGRQGPAIHNNLNNANNKTL"
XX
SQ   Sequence 948 BP; 284 A; 229 C; 232 G; 203 T; 0 other;

aj580954 Length: 948  23-JAN-2007  Type: N  Check: 9167  ..

       1  atgcctccca aaccggcacc aggtgataat gaaggtaacg caagtgggtt
      51  cacaccaact ccacctccac ccccaccagc acgaactgcg gaagaggcaa
     101  gatcgaggct tgcggagatg gaacgagagc gtgagcagga gcaactacta
     151  gacgagatga actccgatac cacaactgag gatgctagaa acataagccg
     201  cctgacacaa ctcgcggcac tactgaggag agagcagacg aatgtgcacg
     251  tcacaaacat ggctttagag ataggtagac ctgcactcca acctccaccc
     301  agtatgcgag gggatccaac taatatgtac agtcaggttt ctaccgactt
     351  cctgtggaaa attaaaccac cgaggatttc taacaacatg gcgacatccg
     401  aggatatggt gaagatacaa gtggcccttg aaggcttggg ggtacctacc
     451  gaatcagtca aagaagtgat catccgtcta gtgctcaatt gtgcaaatac
     501  cagtagctct gtttaccaag atccgaaggg ggtgattgag tgggatggtg
     551  gagcgattat tgctgacgac gtcgtaggag ttatcactga acacagcaca
     601  cttcgaaaag tatgccgtct ctatgcagct gttgcatgga actatatgca
     651  tttacagcag accccacctt ctgattggtc ggctatgggc tttcatccaa
     701  atgttaaata cgctgccttt gactttttcg accatgttga aaatggagcc
     751  gcaatcagac caagtggcgg catagtgcct aaacccacac gtgcggagta
     801  tgtggcgtac aatacttaca agatgttggc cctcaataag gccaacaaca
     851  atgatacctt cggtaatttc gattccgcta ttacgggtgg gagacaagga
     901  ccggccattc acaacaatct gaacaatgcg aataataaga cattataa