Sequence of DPV Lily symptomless virus

Lily symptomless virus cp gene for coat protein, genomic RNA, isolate Palampur

ACC No: AJ585052

Dated: 2005-09-28 | Length: 885 | CRC: 440654219

                !!NA_SEQUENCE 1.0
ID   AJ585052   standard; genomic RNA; VRL; 885 BP.
XX
AC   AJ585052;
XX
SV   AJ585052.2
XX
DT   09-OCT-2003 (Rel. 77, Created)
DT   28-SEP-2005 (Rel. 85, Last updated, Version 3)
XX
DE   Lily symptomless virus cp gene for coat protein, genomic RNA, isolate
DE   Palampur
XX
KW   coat protein; cp gene.
XX
OS   Lily symptomless virus (LSV)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Carlavirus.
XX
RN   [1]
RC   revised by Author
RP   1-885
RA   Singh A.K.;
RT   ;
RL   Submitted (07-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL   Singh A.K., Floriculture Division, Institute of Himalayan Resource Tech.,
RL   P. O. Box No. 6, Palampur Distt. Kangra, Himachal Pradesh - 176 061, INDIA.
XX
RN   [3]
RA   Singh A.K., Hallan V., Ram R., Zaidi A.A.;
RT   "Variability in the coat protein of Lily symptomless virus isolates
RT   infectingvarious lily species";
RL   Plant Pathol. 54(5):621-624(2005).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .885
FT                   /db_xref="taxon:12173"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Lily symptomless virus"
FT                   /isolate="Palampur"
FT   CDS             7. .885
FT                   /db_xref="GOA:Q70DZ3"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q70DZ3"
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="CAE51028.3"
FT                   /translation="MQSRPDQESGSASETPARGRPTPSDAPRDEPTNYNNNAESLLEQR
FT                   LTRLIEKLNAEKHNSNLRNVAFEIGRPSLEPTSAMRRNPANPYGRFSIDELFKMKVGVV
FT                   SNNMATTEQMAKIASDIAGLGVPTGARRISNIANGHHVCLREPVQRSLTLKGSIEFENG
FT                   AVPVDSIAAIMKKHAGLRKVCRLYAPIVWNSMLVRNQPPADWQAMGFQYNTRFAAFDTF
FT                   DYVTNQAAIQPVEGIIRRPTSAEVIAHNAHKQLALDRSNRNERLGSLETEYTGGVQGAE
FT                   IVRNHRYANNG"
XX
SQ   Sequence 885 BP; 245 A; 240 C; 231 G; 169 T; 0 other;

 AJ585052  Length: 885  October 4, 2005 08:40  Type: N  Check: 1032  ..

       1  ggatccatgc aatcaagacc agaccaagaa tccggctctg caagcgagac
      51  ccctgcacgc ggcaggccta cacctagtga tgcaccaaga gacgagccca
     101  ccaattacaa taataacgct gagtcactgt tagagcaacg actaacccga
     151  ctgatcgaga agctcaatgc tgaaaagcac aattccaatc tgcgaaatgt
     201  ggctttcgag atcgggaggc cctcactgga acccacgagt gccatgcgaa
     251  ggaaccctgc taacccttac gggagattct caattgacga actcttcaag
     301  atgaaggttg gcgtcgtatc taacaacatg gcaaccactg aacaaatggc
     351  caagatagcg tcagacatcg cagggcttgg ggtaccaacg ggagcgcgtc
     401  gcatcagtaa tattgcaaat gggcatcatg tgtgcttgcg tgagccagtt
     451  cagcgttcct tgaccctgaa gggcagcatt gagtttgaga atggagcggt
     501  gcccgtcgac tccatcgctg cgatcatgaa gaagcacgct ggactgcgga
     551  aagtctgccg gctctatgcc cctatcgtgt ggaacagcat gctcgtgcga
     601  aatcaaccac cagctgattg gcaagctatg ggcttccaat acaacacgcg
     651  gttcgcagct tttgacacct tcgactacgt gactaaccag gcggctatcc
     701  aacctgtcga ggggatcatc aggcgaccca cttctgctga ggtcattgcc
     751  cacaacgcgc acaagcaatt agccctggat aggtcaaacc gcaatgagcg
     801  tctggggagc ctggaaaccg aatacaccgg cggggtacaa ggagctgaaa
     851  tcgtccgaaa tcatcgatac gcaaataatg gatga