Sequence of DPV Chrysanthemum virus B

Chrysanthemum virus B TGB1 gene for triple gene block protein 1, genomic RNA, isolate Palampur

ACC No: AJ608920

Dated: 2003-12-10 | Length: 696 | CRC: 1724141531

                !!NA_SEQUENCE 1.0
ID   AJ608920   standard; genomic RNA; VRL; 696 BP.
XX
AC   AJ608920;
XX
SV   AJ608920.2
XX
DT   25-NOV-2003 (Rel. 77, Created)
DT   10-DEC-2003 (Rel. 78, Last updated, Version 2)
XX
DE   Chrysanthemum virus B TGB1 gene for triple gene block protein 1, genomic
DE   RNA, isolate Palampur
XX
KW   TGB1 gene; triple gene block protein 1.
XX
OS   Chrysanthemum virus B
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Carlavirus.
XX
RN   [1]
RC   revised by [3]
RA   Singh A.K.;
RT   ;
RL   Submitted (25-NOV-2003) to the EMBL/GenBank/DDBJ databases.
RL   Singh A.K., Floriculture Division, Institute of Himalayan Bioresource
RL   Tech., P.O. Box-6, Palampur, Himachal Pradesh - 176061, INDIA.
XX
RN   [2]
RA   Singh A.K., Singh L., Hallan V., Ram R., Zaidi A.A.;
RT   "Variability assessment of different ORFs among different isolates of
RT   Chrysanthemum virus B in India";
RL   Unpublished.
XX
RN   [3]
RP   1-696
RA   Singh A.K.;
RT   ;
RL   Submitted (10-DEC-2003) to the EMBL/GenBank/DDBJ databases.
RL   Singh A.K., Floriculture Division, Institute of Himalayan Bioresource
RL   Tech., P.O. Box-6, Palampur, Himachal Pradesh - 176061, INDIA.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .696
FT                   /country="India:Palampur"
FT                   /db_xref="taxon:12165"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Chrysanthemum virus B"
FT                   /isolate="Palampur"
FT   CDS             1. .696
FT                   /gene="TGB1"
FT                   /product="triple gene block protein 1"
FT                   /protein_id="CAE75647.2"
FT                   /translation="MDVFVKILSDFGFSRLSSSLHIPIIVHCVPGAGKSSCIRALLKAD
FT                   SRFVAYTLGVPDPCNLDGLCIKAFTGSVDPKCFNILDEYTRYNGDTSDFFALFGDPVQS
FT                   PPRNLYRAHFKAVISKRFGRCTAQLLRELGFEVESTKEDLVSIRGLYDFDPVGTVLYYE
FT                   KEIGCLLRAHSIEAYEPEEVVGKTFETVTFVTAENHIPAESRHLVYQCLTRHRSVLHLM
FT                   TPDASYTST"
XX
SQ   Sequence 696 BP; 170 A; 155 C; 166 G; 205 T; 0 other;

AJ608920  Length: 696  December 23, 2003 09:26  Type: N  Check: 5200  ..

       1  atggatgtgt ttgtaaagat tttgagtgat tttggtttct cgcgtttaag
      51  tagtagcttg catattccta tcattgttca ctgcgtacct ggagctggga
     101  agagtagttg cattcgggct ttgttgaaag cggactcaag gttcgtggcg
     151  tacactttgg gagttcccga tccttgcaat ttggacggtc tgtgcatcaa
     201  agcatttact gggtctgttg atcctaagtg tttcaatatc cttgacgaat
     251  acacccgcta caacggtgac actagtgatt tcttcgcact ctttggtgat
     301  ccagtccaga gccctccgcg caatttatac agagctcatt tcaaagccgt
     351  aataagcaag cgatttggta ggtgcactgc gcaattactc cgggagcttg
     401  gatttgaggt tgagagcaca aaagaggatt tagttagcat ccgaggattg
     451  tacgattttg atcccgtagg cacggtcctc tactacgaga aggaaatagg
     501  ttgtttgttg agggcccatt caattgaagc ctacgaacct gaagaagttg
     551  tcgggaaaac ttttgaaaca gttaccttcg taactgctga gaaccatata
     601  cccgcagaat cccgacactt ggtttaccag tgtctcacac gacaccgttc
     651  agtgctacat cttatgaccc ctgatgcctc ttacacctcc acctga