Sequence of DPV Soybean mosaic virus

Soybean mosaic virus partial polyprotein gene for P1 protein, genomic RNA, isolate YZ

ACC No: AJ628762

Dated: 2005-04-15 | Length: 990 | CRC: -2074752930

                !!NA_SEQUENCE 1.0
ID   AJ628762   standard; genomic RNA; VRL; 990 BP.
XX
AC   AJ628762;
XX
SV   AJ628762.1
XX
DT   22-JAN-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Soybean mosaic virus partial polyprotein gene for P1 protein, genomic RNA,
DE   isolate YZ
XX
KW   P1 protein; polyprotein.
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-990
RA   Adams M.J.;
RT   ;
RL   Submitted (25-FEB-2004) to the EMBL/GenBank/DDBJ databases.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [3]
RA   Shi Y.H., Hong X.Y., Chen J., Adams M.J., Zheng H.Y., Lin L., Qing B.X.,
RA   Chen J.;
RT   "Further molecular characterisation of potyviruses infecting aroid plants
RT   formedicinal use in China";
RL   Arch. Virol. 150(1):125-135(2005).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .990
FT                   /country="China:Henan:Yuzhou"
FT                   /db_xref="taxon:12222"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Soybean mosaic virus"
FT                   /isolate="YZ"
FT                   /strain="P"
FT                   /specific_host="Pinellia ternata"
FT   CDS             1. .>990
FT                   /db_xref="GOA:Q5K4C4"
FT                   /db_xref="UniProt/TrEMBL:Q5K4C4"
FT                   /product="polyprotein"
FT                   /protein_id="CAF32252.1"
FT                   /translation="MASIMIGSFACPLTASTKVVTGITRGEPRVEVGVHGAALTIAPHA
FT                   MAPIARMVRPSATQVNNYGRRLIKQAQEQTDRAFKNFFNKPEMKESLFKKSHAKLVRGR
FT                   KQSWRLSTPTLKIAQQRQAEADKLLQEKKDFLAGKYNPEDVVGGYVHVRDQTERGEQIS
FT                   FKGPFWHRTYKTKRVHMHAPNNFLRASASQIERDLLRQLHHSSTKIEYIGKKKQRLHAQ
FT                   YVQAENYGRYAKIRLPHEDKGVRLRQEIDSTVWAATIQRLARAVKHSQIIHDNEITYGW
FT                   SGIVMDQRQPLMHKITRNSSFVIRGRLDGRLVDACEILPRGTLHQIVQF"
FT   mat_peptide     1. .990
FT                   /product="P1 protein"
XX
SQ   Sequence 990 BP; 299 A; 218 C; 249 G; 224 T; 0 other;

 AJ628762  Length: 990  April 19, 2005 08:56  Type: N  Check: 9333  ..

       1  atggctagca ttatgattgg ttccttcgct tgccctctca cggccagcac
      51  caaggtggtg actggaatca cacgtggaga gccacgtgtg gaagtggggg
     101  tacatggagc tgcactcact attgcgcctc atgcgatggc gccgatagcg
     151  aggatggtgc gaccaagtgc cactcaggtt aataactatg ggcgacgctt
     201  aataaagcag gcccaggaac aaacagatag agctttcaag aatttcttca
     251  ataagcctga aatgaaggag tcgcttttca aaaagagcca cgctaaacta
     301  gtgcgtggcc gtaaacaaag ttggcgtttg tccacaccaa ctcttaaaat
     351  tgctcaacag cggcaggcag aggctgataa actcctgcaa gaaaagaaag
     401  actttcttgc aggaaaatac aatcctgagg atgttgtcgg gggttacgtt
     451  catgtgcgag accagacgga aagaggagaa caaatcagtt tcaaaggacc
     501  cttctggcac cgcacataca aaactaaacg tgtgcacatg cacgctccga
     551  acaacttcct acgcgcaagt gcaagccaaa ttgagcgcga tctgctacgt
     601  cagctccatc acagctccac gaagattgag tatattggga agaagaaaca
     651  gcgcttgcac gcacaatatg tgcaagctga aaattatggg cggtatgcaa
     701  aaattcgcct tccacatgag gataaaggag tgcgacttag gcaggaaatt
     751  gatagcactg tatgggctgc aaccatacag cgtttggcca gagcagttaa
     801  acactctcaa ataatccatg acaatgagat cacctatggg tggagtggca
     851  tagtcatgga tcaaagacag cctttaatgc acaaaattac tcgtaatagt
     901  agttttgtta ttagagggcg tcttgatggc agattggtgg atgcttgtga
     951  aatacttccg cggggtacac ttcaccaaat tgttcaattt