Sequence of DPV Soybean mosaic virus

Soybean mosaic virus partial P1 gene for serine protease, isolate CN15

ACC No: AJ639648

Dated: 2005-07-21 | Length: 927 | CRC: 590382479

                !!NA_SEQUENCE 1.0
ID   AJ639648   standard; genomic RNA; VRL; 927 BP.
XX
AC   AJ639648;
XX
SV   AJ639648.1
XX
DT   13-APR-2004 (Rel. 79, Created)
DT   21-JUL-2005 (Rel. 84, Last updated, Version 2)
XX
DE   Soybean mosaic virus partial P1 gene for serine protease, isolate CN15
XX
KW   P1 gene; serine protease.
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-927
RA   Choi C.W.;
RT   ;
RL   Submitted (10-APR-2004) to the EMBL/GenBank/DDBJ databases.
RL   Choi C.W., Biology & Medicinal Science, Pai Chai University, 439-6 Doma-2
RL   dong, Seo-gu, Daejeon, 302-735, SOUTH KOREA.
XX
RN   [2]
RA   Choi B.K., Ahn H.J., Choi C.W.;
RT   "Emergence of new isolates of Soybean mosaic virus overcoming Rsv
RT   resistance of differential cultivars, isolated from Korean soybean
RT   cultivars.";
RL   Unpublished.
XX
RN   [3]
RA   Choi B.K., Koo J.M., Ahn H.J., Yum H.J., Choi C.W., Ryu K.H., Chen P.,
RA   Tolin S.A.;
RT   "Emergence of Rsv-resistance breaking Soybean mosaic virus isolates
RT   fromKorean soybean cultivars";
RL   Virus Res. 112(1-2):42-51(2005).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .927
FT                   /db_xref="taxon:12222"
FT                   /mol_type="genomic RNA"
FT                   /note="overcomes Rsv resistance"
FT                   /virion
FT                   /organism="Soybean mosaic virus"
FT                   /isolate="CN15"
FT                   /specific_host="Glycine max"
FT   CDS             1. .>927
FT                   /db_xref="GOA:Q6ZY36"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProt/TrEMBL:Q6ZY36"
FT                   /evidence=EXPERIMENTAL
FT                   /gene="P1"
FT                   /product="serine protease"
FT                   /protein_id="CAG25895.1"
FT                   /translation="MATIMIGSMAISVPNTHISCASNSVMPVRAVQMAKQVPSVRGVLY
FT                   TLKREGNTQVHKHEEALRKFQEAFDQDAGIQRRLLVNKHSSIQSTKKNGLTLRHLALEQ
FT                   ARAKEAAIARRKQEEEDFLNGKYEQQFYAGVSTTKSMKSEGGSVGFRTKYWRPTPKKTK
FT                   ERRATSQRTKPTYVLEEVLSIASKSGKPVEFITGGKGKRVKVCYVRKHGAMLPKFSLPH
FT                   EEGKYIHQELQYASIYEFLPYICMFAKYKSISADDITYGDSGLLFDERSSLTTNHTKLP
FT                   YFVVRGRKNEKLVNALEVVENMEDIQHY"
XX
SQ   Sequence 927 BP; 298 A; 172 C; 228 G; 229 T; 0 other;

 AJ639648  Length: 927  August 1, 2005 11:49  Type: N  Check: 6878  ..

       1  atggcaacaa tcatgattgg aagcatggcg atttctgtgc caaacactca
      51  catctcgtgc gcatcaaatt ctgtgatgcc ggttcgagca gttcagatgg
     101  caaaacaagt gccttctgtt cgaggggtgt tatacacact taaaagagaa
     151  ggcaacacgc aagtgcataa gcatgaggag gcactgcgca aatttcaaga
     201  agcattcgac caagatgctg gcattcagcg aaggcttctg gtaaacaagc
     251  atagttccat acaatccaca aagaagaatg gtctaacctt gcgtcattta
     301  gctttagagc aggctcgagc aaaagaagcg gcaattgcaa ggcgaaagca
     351  agaagaggaa gactttctca atgggaagta tgaacagcaa ttttatgctg
     401  gtgtttctac tacaaagtcc atgaagtctg aaggagggag tgttgggttc
     451  agaacgaaat actggagacc aactccaaag aagactaaag aaaggcgtgc
     501  aacatcacag cgtacgaaac caacatatgt cttggaggag gttctttcta
     551  tagcttcaaa gagtggtaag ccggttgaat ttatcacagg aggtaaagga
     601  aagagagtca aagtctgtta tgtgcgtaag catggcgcaa tgttgcccaa
     651  gttctccctt ccgcatgaag aaggcaaata tattcatcag gagcttcagt
     701  atgcaagcat atatgagttt cttccttata tttgcatgtt tgcaaaatat
     751  aagagcataa gtgcggatga tataacttat ggagatagtg gtttactgtt
     801  tgatgagcga tcatctttaa ccacaaatca cactaagttg ccgtactttg
     851  ttgttcgggg aaggaagaat gagaagctcg tcaacgctct tgaagtggtt
     901  gaaaacatgg aggatattca gcactac