Sequence of DPV Soybean mosaic virus

Soybean mosaic virus partial P1 gene for serine protease, isolate CN12

ACC No: AJ639650

Dated: 2005-07-21 | Length: 927 | CRC: -1469307059

                !!NA_SEQUENCE 1.0
ID   AJ639650   standard; genomic RNA; VRL; 927 BP.
XX
AC   AJ639650;
XX
SV   AJ639650.1
XX
DT   13-APR-2004 (Rel. 79, Created)
DT   21-JUL-2005 (Rel. 84, Last updated, Version 2)
XX
DE   Soybean mosaic virus partial P1 gene for serine protease, isolate CN12
XX
KW   P1 gene; serine protease.
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-927
RA   Choi C.W.;
RT   ;
RL   Submitted (10-APR-2004) to the EMBL/GenBank/DDBJ databases.
RL   Choi C.W., Biology & Medicinal Science, Pai Chai University, 439-6 Doma-2
RL   dong, Seo-gu, Daejeon, 302-735, SOUTH KOREA.
XX
RN   [2]
RA   Choi B.K., Ahn H.J., Choi C.W.;
RT   "Emergence of new isolates of Soybean mosaic virus overcoming Rsv
RT   resistance of differential cultivars, isolated from Korean soybean
RT   cultivars.";
RL   Unpublished.
XX
RN   [3]
RA   Choi B.K., Koo J.M., Ahn H.J., Yum H.J., Choi C.W., Ryu K.H., Chen P.,
RA   Tolin S.A.;
RT   "Emergence of Rsv-resistance breaking Soybean mosaic virus isolates
RT   fromKorean soybean cultivars";
RL   Virus Res. 112(1-2):42-51(2005).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .927
FT                   /db_xref="taxon:12222"
FT                   /mol_type="genomic RNA"
FT                   /note="overcomes Rsv resistance"
FT                   /virion
FT                   /organism="Soybean mosaic virus"
FT                   /isolate="CN12"
FT                   /specific_host="Glycine max"
FT   CDS             1. .>927
FT                   /db_xref="GOA:Q6ZY34"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProt/TrEMBL:Q6ZY34"
FT                   /evidence=EXPERIMENTAL
FT                   /gene="P1"
FT                   /product="serine protease"
FT                   /protein_id="CAG25897.1"
FT                   /translation="MATIMIGSMAISVPNTHILCASNSVMPVQAVQMAKQVPSARGVLY
FT                   TLKREGNTQVHKHDEALRKFQEAFDQDVGIQQRLLVNKHSSIQFTKKNGLTLRRLTLEQ
FT                   ARAKEAAIARRRQEEEDFLNGKYEQQFYAGVSATKSRKFEGGSVGFRTKYWRPTPKKTK
FT                   ERRATSQCRKPTYVLEEVLSIASKSGKLVEFITGGKGKRVKVCYVRKHGAILPKFSLPH
FT                   EEGKYIHQELQYASTYEFLPYICMFAKYKSINADDITYGDSGLLFDERSSLTTNHTKLP
FT                   YFVVRGRKNEKLVNALEVVENMDDIQHY"
XX
SQ   Sequence 927 BP; 302 A; 168 C; 224 G; 233 T; 0 other;

 AJ639650  Length: 927  August 1, 2005 11:49  Type: N  Check: 8696  ..

       1  atggcaacaa tcatgattgg aagcatggcg atttctgtgc caaacaccca
      51  catcttgtgc gcatcgaatt ctgtgatgcc ggttcaagca gttcagatgg
     101  caaaacaagt gccttctgct cgaggggtat tatacacact taaaagagag
     151  ggcaacacgc aagtgcataa gcatgatgag gcgctgcgca aatttcaaga
     201  agcatttgac caagatgttg gcattcagca aaggcttctt gtaaacaagc
     251  atagttccat acaattcaca aagaagaatg gtttaacctt gcgtcgctta
     301  actttagagc aggctcgagc aaaagaagcg gcaattgcaa ggcgaaggca
     351  agaagaggaa gactttctca atgggaaata tgaacagcaa ttttatgctg
     401  gtgtttccgc tacaaagtcc aggaagtttg aaggagggag tgttgggttc
     451  agaacaaaat actggagacc aactccaaag aagactaaag aaaggcgtgc
     501  aacatcgcag tgcaggaaac caacatatgt tttggaggag gttctctcta
     551  tagcttcaaa gagtggtaag ctagttgaat ttatcacagg aggcaaagga
     601  aagagagtca aagtctgtta tgtgcggaag catggcgcaa tattgcctaa
     651  gttctccctc ccacatgaag aaggcaaata tatccatcag gagcttcagt
     701  atgcaagcac atatgaattt cttccttata tttgcatgtt tgcaaaatat
     751  aagagcataa atgcggatga tataacttat ggagatagtg gtttattgtt
     801  tgatgagcga tcgtctttaa ccacaaatca cactaagtta ccgtactttg
     851  ttgttcgggg aaggaagaat gagaagctcg ttaatgctct tgaagtggtt
     901  gaaaacatgg atgatattca gcactac