Sequence of DPV Soybean mosaic virus

Soybean mosaic virus partial P1 gene for serine protease, isolate CN10

ACC No: AJ639651

Dated: 2005-07-21 | Length: 927 | CRC: -2109396503

                !!NA_SEQUENCE 1.0
ID   AJ639651   standard; genomic RNA; VRL; 927 BP.
XX
AC   AJ639651;
XX
SV   AJ639651.1
XX
DT   13-APR-2004 (Rel. 79, Created)
DT   21-JUL-2005 (Rel. 84, Last updated, Version 2)
XX
DE   Soybean mosaic virus partial P1 gene for serine protease, isolate CN10
XX
KW   P1 gene; serine protease.
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-927
RA   Choi C.W.;
RT   ;
RL   Submitted (10-APR-2004) to the EMBL/GenBank/DDBJ databases.
RL   Choi C.W., Biology & Medicinal Science, Pai Chai University, 439-6 Doma-2
RL   dong, Seo-gu, Daejeon, 302-735, SOUTH KOREA.
XX
RN   [2]
RA   Choi B.K., Ahn H.J., Choi C.W.;
RT   "Emergence of new isolates of Soybean mosaic virus overcoming Rsv
RT   resistance of differential cultivars, isolated from Korean soybean
RT   cultivars.";
RL   Unpublished.
XX
RN   [3]
RA   Choi B.K., Koo J.M., Ahn H.J., Yum H.J., Choi C.W., Ryu K.H., Chen P.,
RA   Tolin S.A.;
RT   "Emergence of Rsv-resistance breaking Soybean mosaic virus isolates
RT   fromKorean soybean cultivars";
RL   Virus Res. 112(1-2):42-51(2005).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .927
FT                   /db_xref="taxon:12222"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Soybean mosaic virus"
FT                   /isolate="CN10"
FT                   /specific_host="Glycine max"
FT   CDS             1. .>927
FT                   /db_xref="GOA:Q6ZY33"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProt/TrEMBL:Q6ZY33"
FT                   /evidence=EXPERIMENTAL
FT                   /gene="P1"
FT                   /product="serine protease"
FT                   /protein_id="CAG25898.1"
FT                   /translation="MATIMIGSMAISVPNTHILCASNSVVPVKAVQMAKQVPSARGVLH
FT                   TLKREGNMQMHKHEEALRKFQEAFDQDADIQRRLLVNKHSSIQSTKKNGLTLRRLTLEQ
FT                   ARAKETAFARRRQEEEDFLNGKYEQQFYAGVSATKSMKFEGGSVGFRTKYWRPTPKKTK
FT                   ERRATSQCRKPTYVLEEVLSIASRSGKLVEFITGGKGKRVKVCYVRKMGAKLPKFSLPH
FT                   EEGKYIHQELQYASTYEFLPYICMFAKYKSINADDITYGDSGLLFDERSSLTTNHTKLP
FT                   YFVVRGRKDGKLINALEVVENMDDIQHY"
XX
SQ   Sequence 927 BP; 302 A; 172 C; 224 G; 229 T; 0 other;

 AJ639651  Length: 927  August 1, 2005 11:49  Type: N  Check: 6935  ..

       1  atggcaacaa tcatgattgg aagcatggcg atttctgtgc caaacactca
      51  catcttgtgc gcatcgaatt ctgtggtgcc ggttaaagca gttcagatgg
     101  caaaacaagt accttctgct cgaggggtgt tacacacact taaaagagag
     151  ggcaatatgc aaatgcataa gcatgaggaa gcgctgcgca aatttcaaga
     201  agcattcgac caagatgctg acattcagcg aaggcttctg gtaaacaagc
     251  atagttccat acaatccaca aagaagaatg gcttaacctt gcgtcgctta
     301  actttagagc aggctcgagc aaaagaaacg gcatttgcta ggcgaaggca
     351  agaagaggaa gactttctca atgggaaata tgaacagcaa ttttatgctg
     401  gtgtttccgc tacaaagtcc atgaagtttg agggagggag tgttggattc
     451  agaacaaaat actggagacc aactccaaag aagactaaag aaaggcgtgc
     501  aacatcacag tgtaggaaac caacatatgt tttggaggag gttctttcta
     551  tagcctcaag gagtggtaag ctggttgaat ttatcacagg aggcaaagga
     601  aagagagtca aagtctgcta tgtgcgtaag atgggtgcaa aattgcccaa
     651  gttctccctt ccgcatgaag aaggcaaata tatccatcag gagcttcagt
     701  atgccagcac atatgaattt cttccttata tttgcatgtt tgcaaaatat
     751  aagagcataa atgcggatga tataacttat ggagatagtg gtttactgtt
     801  tgatgagcga tcatccttaa ccacaaatca cactaagtta ccgtacttcg
     851  ttgttcgagg aaggaaggat gggaagctca ttaacgctct tgaagtggtt
     901  gaaaacatgg atgatattca gcactac