Sequence of DPV Faba bean necrotic stunt virus

Faba bean necrotic stunt virus segment DNA-C, complete sequence

ACC No: AJ749900

Dated: 2010-09-07 | Length: 994 | CRC: -1320986431

                
ID   AJ749900; SV 2; circular; genomic DNA; STD; VRL; 994 BP.
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AC   AJ749900;
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DT   07-JAN-2010 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
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DE   Faba bean necrotic stunt virus segment DNA-C, complete sequence
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KW   cell-cycle link protein; clink gene.
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OS   Faba bean necrotic stunt virus
OC   Viruses; ssDNA viruses; Nanoviridae; Nanovirus.
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RN   [1]
RC   revised by author [04-JAN-2010]
RP   1-994
RA   Katul L.;
RT   ;
RL   Submitted (24-JUN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Katul L., Inst. Plant Virol.,Microbiol.& Biosafety, Fed. Biol. Res. Ctr. f.
RL   Agr. & Forestry, Messeweg 11-12, Braunschweig 38104, GERMANY.
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RN   [2]
RX   DOI; 10.1128/JVI.00607-10.
RX   PUBMED; 20592071.
RA   Grigoras I., Timchenko T., Grande-Perez A., Katul L., Vetten H.J.,
RA   Gronenborn B.;
RT   "High variability and rapid evolution of a nanovirus";
RL   J. Virol. 84(18):9105-9117(2010).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .994
FT                   /organism="Faba bean necrotic stunt virus"
FT                   /segment="DNA-C"
FT                   /host="Vicia faba"
FT                   /isolate="JKI-1998/99"
FT                   /mol_type="genomic DNA"
FT                   /country="Ethiopia:Holetta"
FT                   /db_xref="taxon:283824"
FT   TATA_signal     256. .262
FT                   /gene="clink"
FT   CDS             297. .806
FT                   /transl_table=1
FT                   /gene="clink"
FT                   /product="cell-cycle link protein"
FT                   /function="in replication"
FT                   /db_xref="UniProtKB/TrEMBL:C7DLN4"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAG77483.1"
FT                   /translation="MGLKYFSVLPVELREKIVRDHLREERKKEFLENAIEDSCRRHQSL
FT                   ITEDPSTEDLLSLCKFLESLAYYVGNQFNTRCLIKWRKDVPFQIKYGVMEEQHIKLYGI
FT                   LDMEDLACRELLIPEEEDDITYEDGIIVNCKQLDNLFAELGINVVYITVSKNCIHTPLN
FT                   KEIVIN"
FT   polyA_signal    823. .828
FT                   /gene="clink"
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SQ   Sequence 994 BP; 302 A; 160 C; 212 G; 320 T; 0 other;

aj749900 Length: 994  07-SEP-2010  Type: N  Check: 2543  ..

       1  acccccgtcc cgggttcaga gtcacgtacg gagtgactaa tagccgttgg
      51  attatcttac acgtggacga tcaggatctg tgattcgtga agcgaatctg
     101  acggaagatc gttcacactc acgtggtagg tcccgacaat tgcttttgct
     151  ttactttatc taaagtaaag caagtgggtc tactttaatt attctttttt
     201  ggtggagtac agctgtcttt gcttcttcac gaagcaaagg actttctctc
     251  tcttctataa aaaagcttcg tcttcttcgt tgttcataca acgaaaatgg
     301  gtctgaaata tttctctgtt ctcccggtgg aattaagaga gaagatcgtg
     351  agagatcatc tcagagaaga aaggaagaaa gagtttttag agaatgctat
     401  tgaagatagt tgcagaagac atcaatcatt gattactgaa gacccatcaa
     451  ctgaagacct gttgtctctc tgtaagttct tagagtctct agcttattat
     501  gttggtaatc agttcaatac aagatgctta ataaaatgga ggaaggatgt
     551  tccgtttcaa atcaagtatg gagtcatgga agaacagcat attaagctat
     601  atggtatatt agacatggaa gaccttgcat gtagagagtt gctgattcca
     651  gaagaagaag acgatattac ttatgaagat ggtattatag ttaattgtaa
     701  gcaattagat aacttgtttg ctgaactagg cataaatgtt gtttatatta
     751  cagtaagcaa gaattgtatt catactcctt tgaacaagga gattgtaatt
     801  aattaatgct aatgagatat ttaataatac ttaatatgta tttgtttata
     851  ttgatattgt ttttaattac tctgcgaagc tatatgtctc ggcccaatag
     901  gcccaatagt ctcaaggccc aatagatttt acattaaatt ggatcagctg
     951  acgtcagctg atcccgtgat gacgtaggga cggggcttag tatt