Sequence of DPV Chrysanthemum virus B

Chrysanthemum virus B CP gene for coat protein, genomic RNA

ACC No: AJ812569

Dated: 2007-01-23 | Length: 948 | CRC: 395142176

                
ID   AJ812569; SV 1; linear; genomic RNA; STD; VRL; 948 BP.
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AC   AJ812569;
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DT   01-SEP-2004 (Rel. 81, Created)
DT   23-JAN-2007 (Rel. 90, Last updated, Version 2)
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DE   Chrysanthemum virus B CP gene for coat protein, genomic RNA
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KW   coat protein; CP gene.
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OS   Chrysanthemum virus B
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Carlavirus.
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RN   [1]
RP   1-948
RA   Singh L.;
RT   ;
RL   Submitted (01-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL   Singh L., Floriculture Division, Institute of Himalayan Bioresource Tech.,
RL   P.O. Box - 6, Palampur, Himachal Pradesh - 176061, INDIA.
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RN   [3]
RA   Singh L., Hallan V., Jabeen N., Singh A.K., Ram R., Martin D.P.,
RA   Zaidi A.A.;
RT   "Coat protein gene diversity among Chrysanthemum virus B isolates from
RT   India";
RL   Arch. Virol. 152(2):405-413(2007).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .948
FT                   /organism="Chrysanthemum virus B"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Jammu"
FT                   /virion
FT                   /db_xref="taxon:12165"
FT   CDS             1. .948
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q683P6"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR001920"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:Q683P6"
FT                   /protein_id="CAH25326.1"
FT                   /translation="MPPKPAPGDSEGDPSGTVPTPPPPPPARTAEEARLRLAEMERERE
FT                   LEQQTEETNPDSPTEDARDISRLTQLAALLRREQTSVHVTNMALEIGRPALQPPPNMRA
FT                   DSSNMYSQVSTDFLWRIKPQKISNNMATSEDMVKIQVGLEGLGIPTDSVKEVIIRLVLN
FT                   CANTSSSGYQDPKGVIEWDGGAIIADDVVGVITEHSTLRKVCRLYAAVAWNYMHLQQTP
FT                   PSDWAAMGFHPNVKYAAFDFFDYVENGAAIKPSGGIVPKPTRAEYVAYNTYKMLALNKA
FT                   NNNDTYGNFDAAITGGRQGPTIHNNLNNANNKTL"
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SQ   Sequence 948 BP; 274 A; 223 C; 241 G; 210 T; 0 other;

aj812569 Length: 948  23-JAN-2007  Type: N  Check: 2062  ..

       1  atgcctccca aaccggcacc aggtgattct gaaggtgatc ctagcgggac
      51  tgtaccaact ccacctccac cccctccagc gcgcaccgcg gaagaagcta
     101  gattgaggct tgcagagatg gaacgcgagc gcgagctaga gcaacagaca
     151  gaagagacaa atccggactc cccgacagag gacgcgaggg atattagccg
     201  cttgactcaa cttgcggcac tgttaaggag ggaacaaacg agtgtacatg
     251  ttacgaatat ggccttggaa attggtagac cagctcttca gccaccgccc
     301  aatatgcgag cggattcctc aaatatgtac agtcaggtat caaccgattt
     351  cctgtggagg attaagccgc agaagatttc taataacatg gctacatccg
     401  aggatatggt gaagatacag gtgggtcttg agggccttgg gatacccact
     451  gactcagtca aagaggtgat catccgtcta gtactcaatt gcgcgaacac
     501  gagcagctca ggctatcagg acccaaaagg ggtgatcgag tgggacggtg
     551  gtgcgatcat tgctgatgac gttgtaggtg ttattaccga gcatagtact
     601  ctaagaaagg tatgtcgtct atatgcagct gtggcatgga actacatgca
     651  tttacaacag acaccacctt ctgattgggc tgctatgggt ttccatccaa
     701  atgtcaagta tgctgccttt gactttttcg actatgtcga aaatggggct
     751  gcaatcaagc caagcggtgg catagtaccc aagcccacac gtgcagagta
     801  tgttgcatac aatacctaca agatgctagc tctcaataag gccaataaca
     851  atgataccta tggtaatttc gatgctgcta tcactggggg gaggcaagga
     901  ccaactattc acaacaatct gaacaatgcg aataataaga cattataa