Sequence of DPV Turnip mosaic virus
Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate ZJ2
ACC No: AJ831793
Dated: 2008-04-01 | Length: 1374 | CRC: 1858924066
ID AJ831793; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
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AC AJ831793;
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DT 20-SEP-2004 (Rel. 81, Created)
DT 01-APR-2008 (Rel. 95, Last updated, Version 3)
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DE Turnip mosaic virus partial gene for polyprotein, genomic RNA, isolate ZJ2
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KW HC protein; polyprotein.
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OS Turnip mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1374
RA Zhou X.;
RT ;
RL Submitted (15-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL Hangzhou, Zhejiang, 310029, CHINA.
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RN [2]
RA Shi M., Li H.Y., Schubert J., Zhou X.;
RT "Sequence analysis of cp and hc-pro genes of turnip mosaic virus isolates
RT from china";
RL Acta Virol. 52:59-62(2008).
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Turnip mosaic virus"
FT /isolate="ZJ2"
FT /mol_type="genomic RNA"
FT /virion
FT /db_xref="taxon:12230"
FT CDS <1. .>1374
FT /codon_start=1
FT /product="polyprotein"
FT /db_xref="GOA:Q659P6"
FT /db_xref="InterPro:IPR001456"
FT /db_xref="UniProtKB/TrEMBL:Q659P6"
FT /protein_id="CAH42003.1"
FT /translation="SAAGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEVAALMCL
FT AMFPCGKITCPDCVTDSELSQGQASGPSMQHRLTQLRDVIKSSYPRFKHAVQILDRYEQ
FT SLSSANENYQDFAEIQSISDGVEKAAFPHVNKLNAILIKGATATGEEFSQATKHLLEIA
FT RYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERGYHAKRFFSN
FT YFEIIDPKKGYTQYETRAVPNGSRKLAIGKLIVPTNFEVLREQMKGEPVEPYPVTVECV
FT SKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEENKMYIAK
FT EGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLKVFYPDV
FT ANAELPRMLVDHKTKIIHVVDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSLKHYRVG
FT "
FT mat_peptide <1. .>1374
FT /product="HC protein"
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SQ Sequence 1374 BP; 446 A; 302 C; 326 G; 300 T; 0 other;
aj831793 Length: 1374 01-APR-2008 Type: N Check: 3115 ..
1 agtgcagcag gagccaactt ctggaaaggc ttcgacagat gctttctcgc
51 ataccgtagt gacaatcgcg agcatacatg ctattcaggg ctagatgtta
101 ctgagtgcgg cgaggtggca gcactgatgt gtttagctat gttcccatgc
151 ggaaagataa cctgccctga ctgtgtaaca gatagtgagc tatcccaagg
201 acaagcaagc ggaccatcta tgcagcacag attgacgcag ctgcgcgatg
251 tcatcaagtc aagctaccca cgcttcaagc atgcagtgca gatactagat
301 aggtacgagc aatcactgag cagtgcaaac gaaaactacc aggatttcgc
351 agaaatccag agtataagcg atggagttga gaaagctgca ttcccacacg
401 tcaacaagct aaacgcaata ttgatcaaag gggccacagc gacaggggag
451 gaattctcgc aggctacgaa gcatttgctc gagatagcac gatatctgaa
501 gaacagaact gagaacattg agaagggttc actgaagtcc tttcgcaaca
551 agatttccca gaaagcgcac atcaacccaa cactaatgtg cgacaaccag
601 ctcgatagaa atggaaattt catatggggt gagagaggat accatgcaaa
651 acgattcttc agcaactact ttgagataat cgatccaaag aaaggctaca
701 cccaatatga gacaagagcg gtaccaaatg ggtcacggaa acttgcaatc
751 ggcaaactaa tagtcccaac gaacttcgaa gttctaaggg aacagatgaa
801 aggcgaaccg gtagaaccat acccagtaac agtcgagtgt gtgagcaaat
851 tacagggtga ctttgtccat gcatgttgtt gtgtcacaac agaatcaggc
901 gacccagtct tgtctgaaat aaaaatgcca accaaacacc acctagtaat
951 tggcaacagc ggcgatccaa agtacataga tctccctgag atcgaagaga
1001 acaaaatgta catagcgaaa gaaggttatt gttacatcaa tatcttccta
1051 gctatgctag taaatgtcaa ggagtcgcag gcaaaggagt tcacgaaagt
1101 tgttagggac aaactagttg gcgaacttgg caagtggccc actctgttag
1151 atgtggcaac cgcttgttat ttcctgaaag tattttaccc agacgttgct
1201 aacgctgaat tgccacgcat gctagtggac cataagacaa agataattca
1251 tgtcgttgat tcatatgggt cactgtcaac tggatatcat gtccttaaga
1301 caaatactgt ggagcaactc attaagttca cgagatgcaa tttggagtca
1351 agcttgaaac actaccgcgt cgga