Sequence of DPV Chrysanthemum virus B

Chrysanthemum virus B tgb1 gene for triple gene block 1 protein, genomic RNA, isolate Chamba

ACC No: AJ879073

Dated: 2005-04-15 | Length: 696 | CRC: -1705764044

                !!NA_SEQUENCE 1.0
ID   AJ879073   standard; genomic RNA; VRL; 696 BP.
XX
AC   AJ879073;
XX
SV   AJ879073.1
XX
DT   03-FEB-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Chrysanthemum virus B tgb1 gene for triple gene block 1 protein, genomic
DE   RNA, isolate Chamba
XX
KW   tgb1 gene; triple gene block 1 protein.
XX
OS   Chrysanthemum virus B
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Carlavirus.
XX
RN   [1]
RP   1-696
RA   Jabeen N.;
RT   ;
RL   Submitted (03-FEB-2005) to the EMBL/GenBank/DDBJ databases.
RL   Jabeen N., Floriculture Division, Institute of Himalayan Bioresource Tech.,
RL   P.O. Box 6, Palampur, Himachal Pradesh - 176 061, INDIA.
XX
RN   [2]
RA   Jabeen N., Singh L., Hallan V., Ram R., Zaidi A.A.;
RT   "Variability assessment of different ORFs in different Indian isolates of
RT   Chrysanthemum virus B";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .696
FT                   /country="India:Chamba"
FT                   /db_xref="taxon:12165"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Chrysanthemum virus B"
FT                   /isolate="Chamba"
FT                   /specific_host="chrysanthemum"
FT   CDS             1. .696
FT                   /db_xref="GOA:Q5GML9"
FT                   /db_xref="UniProt/TrEMBL:Q5GML9"
FT                   /gene="tgb1"
FT                   /product="triple gene block 1 protein"
FT                   /protein_id="CAI48079.1"
FT                   /translation="MDVFVKILSDFGFTRLSSSLHLPIIVHCVPGAGKSSCIRALLKAD
FT                   SRFAAYTLGAPDPCNLDGLCITAFTGSVDPNCFNILDEYTRFNGDTCNFFALFGDPVQS
FT                   PPRTLRRAHFKSTLSKRFGKCTAQLLKDLGLEVDSVQEDVVSFRGLYDFDPVGTVLYYE
FT                   KEIGCLLRAHSIEAYEPEEVVGKTFETVTFVTAENHIPAEARHLVYQCLTRHRSGLHLM
FT                   TPDASYTST"
XX
SQ   Sequence 696 BP; 162 A; 164 C; 168 G; 202 T; 0 other;

 AJ879073  Length: 696  April 19, 2005 08:57  Type: N  Check: 9794  ..

       1  atggatgtgt ttgtaaagat tttgagtgat tttggcttta cccgtttgag
      51  tagtagttta catttaccta ttatcgtcca ttgtgtgcct ggggcaggga
     101  agagtagttg cattagagcg ttgttaaagg ctgactcaag attcgcggca
     151  tacaccttgg gtgctccaga tccttgtaac ttggacggct tgtgtatcac
     201  ggcttttacc gggtcagtcg accccaattg cttcaatatc cttgacgagt
     251  acacacgctt taacggagat acctgtaact tttttgcgct atttggtgat
     301  cccgtacaga gtcccccacg caccttgcgt agagcccact tcaagtccac
     351  tcttagtaaa aggtttggta agtgcactgc acaactcctc aaagatctag
     401  gtcttgaggt ggatagtgta caagaggacg ttgtaagctt cagggggttg
     451  tacgattttg atcctgtggg cacggtcctt tactacgaga aagaaattgg
     501  ttgcttattg cgggcccatt ccattgaagc ctacgaacct gaggaagtcg
     551  tcgggaaaac cttcgagacg gtcacttttg tcactgccga gaatcacatc
     601  cctgctgagg ccagacactt ggtataccag tgcttaacac gacaccgttc
     651  tggcttacac cttatgacac ctgatgcctc ttacacctcc acctga