Sequence of DPV Chrysanthemum virus B

Chrysanthemum virus B tgb1 gene for triple gene block 1 protein, genomic RNA, isolate Kanyakumari

ACC No: AJ879520

Dated: 2005-04-15 | Length: 696 | CRC: -1894095424

                !!NA_SEQUENCE 1.0
ID   AJ879520   standard; genomic RNA; VRL; 696 BP.
XX
AC   AJ879520;
XX
SV   AJ879520.1
XX
DT   07-FEB-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Chrysanthemum virus B tgb1 gene for triple gene block 1 protein, genomic
DE   RNA, isolate Kanyakumari
XX
KW   tgb1 gene; triple gene block 1 protein.
XX
OS   Chrysanthemum virus B
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Carlavirus.
XX
RN   [1]
RP   1-696
RA   Singh L.;
RT   ;
RL   Submitted (05-FEB-2005) to the EMBL/GenBank/DDBJ databases.
RL   Singh L., Floriculture Division, Institute of Himalayan Bioresource Tech.,
RL   P.O. Box - 6, Palampur, Himachal Pradesh - 176061, INDIA.
XX
RN   [2]
RA   Singh L., Jabeen N., Hallan V., Ram R., Zaidi A.A.;
RT   "Variability assessment of different ORFs among different isolates of
RT   Chrysanthemum virus B in India";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .696
FT                   /country="India:Kanyakumari"
FT                   /db_xref="taxon:12165"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Chrysanthemum virus B"
FT                   /isolate="Kanyakumari"
FT                   /isolation_source="chrysanthemum"
FT   CDS             1. .696
FT                   /db_xref="UniProt/TrEMBL:Q5F2R3"
FT                   /gene="tgb1"
FT                   /product="triple gene block 1 protein"
FT                   /protein_id="CAI51671.1"
FT                   /translation="MDVFVKILSDFGFTRLSSSLHLPIVVHCVPGAGKSSCIRALLRAD
FT                   SRFIAYTLGAPDPCNLDGLCISTFTGSVDPKCFNILDEYTRFNGDTSKFFALFGDPVQS
FT                   PPRTLLRAHFKSTLSKRFGSCTAQLLRDLGFEVESTGEDLVSIRGLYDFDPVGTVLYYE
FT                   KEIGCLLRAHSIEAYEPEEVVGKTFETVTFVTAENHIPADASHLVFQCLTRHRSVLHLM
FT                   TPDASYTST"
XX
SQ   Sequence 696 BP; 165 A; 163 C; 163 G; 205 T; 0 other;

 AJ879520  Length: 696  April 19, 2005 08:57  Type: N  Check: 2656  ..

       1  atggatgtgt ttgtaaagat tttgagtgat tttggtttta cccgtttgag
      51  tagcagccta catttgccca tcgttgtcca ttgtgtgcca ggtgcaggaa
     101  agagtagttg tattcgagct ttattaagag ctgattcaag gttcatagcc
     151  tacactttgg gtgcacccga tccttgcaac ttagacggct tatgcatcag
     201  cacatttacc ggctcggttg atcccaagtg ttttaacata cttgacgaat
     251  acacacgctt taacggtgat accagtaaat tctttgcgct ttttggtgac
     301  cccgtacaga gtccaccacg taccttgctt agagctcatt tcaagtctac
     351  actcagtaaa cgtttcggca gttgcaccgc gcaactcctc cgagatcttg
     401  ggtttgaggt tgagagcaca ggagaagatt tggtcagcat tcgggggttg
     451  tacgattttg atccagtggg cacggttctt tattacgaga aggagatagg
     501  ttgcctattg agagctcatt ccatcgaagc ctacgaacct gaggaggtcg
     551  tcgggaaaac ctttgaaacg gttacttttg taactgcaga gaatcacata
     601  cctgctgacg ccagtcacct ggttttccag tgccttacaa gacaccgctc
     651  ggtattacac ctcatgactc ctgatgcctc ttacacctcc acctga