Sequence of DPV Chrysanthemum virus B

Chrysanthemum virus B tgb1 gene for triple gene block 1 protein, genomic RNA, isolate Chattisgarh

ACC No: AJ879521

Dated: 2005-04-15 | Length: 696 | CRC: -1327296475

                !!NA_SEQUENCE 1.0
ID   AJ879521   standard; genomic RNA; VRL; 696 BP.
XX
AC   AJ879521;
XX
SV   AJ879521.1
XX
DT   07-FEB-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Chrysanthemum virus B tgb1 gene for triple gene block 1 protein, genomic
DE   RNA, isolate Chattisgarh
XX
KW   tgb1 gene; triple gene block 1 protein.
XX
OS   Chrysanthemum virus B
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Carlavirus.
XX
RN   [1]
RP   1-696
RA   Singh L.;
RT   ;
RL   Submitted (05-FEB-2005) to the EMBL/GenBank/DDBJ databases.
RL   Singh L., Floriculture Division, Institute of Himalayan Bioresource Tech.,
RL   P.O. Box - 6, Palampur, Himachal Pradesh - 176061, INDIA.
XX
RN   [2]
RA   Singh L., Jabeen N., Hallan V., Ram R., Zaidi A.A.;
RT   "Variability assessment of different ORFs among different isolates of
RT   Chrysanthemum virus B in India";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .696
FT                   /country="India:Chattisgarh"
FT                   /db_xref="taxon:12165"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Chrysanthemum virus B"
FT                   /isolate="Chattisgarh"
FT                   /isolation_source="chrysanthemum"
FT   CDS             1. .696
FT                   /db_xref="UniProt/TrEMBL:Q5F2R2"
FT                   /gene="tgb1"
FT                   /product="triple gene block 1 protein"
FT                   /protein_id="CAI51672.1"
FT                   /translation="MDVFVKILSDFGFTRLSSSLHVPIVVHCVPGAGKSSCIRALLKAD
FT                   SRFVAYTLGVPDPCNLDGLCIKAFTGSVNPECFNILDEYTRYNGDTSNFFALFGDPVQS
FT                   PPRNLYRAHLKAVISKRFGRCTAQLLRELGFEVESTKEDLVSIRGLYDFDPVGTVLYYE
FT                   KEIGCLLRAHSIEAYEPEEVVGKTFDTVTFVTAENHIPAEARHLVYQCLTRHRSVLHLM
FT                   TPDASYTST"
XX
SQ   Sequence 696 BP; 170 A; 152 C; 168 G; 206 T; 0 other;

 AJ879521  Length: 696  April 19, 2005 08:57  Type: N  Check: 6643  ..

       1  atggatgtgt ttgtaaagat tttgagtgat tttggcttta cacgtttaag
      51  tagtagttta cacgtgccta tcgttgtcca ctgcgtgcca ggagctggga
     101  agagtagctg cattcgggca ctattaaaag ctgattcaag gttcgtggcg
     151  tacactttgg gtgttcctga tccttgcaat ttggatggtc tgtgcatcaa
     201  agcatttacc gggtctgtta atcctgagtg cttcaatatc cttgacgaat
     251  acactcgcta taacggggac actagtaatt tctttgcact ctttggtgat
     301  ccagtccaga gccctccgcg caatttatac agagctcacc ttaaggctgt
     351  aattagcaag cgatttggta ggtgcactgc gcaattactc cgggagcttg
     401  gatttgaagt tgagagcaca aaagaggatt tagttagcat ccgagggttg
     451  tacgactttg atcccgtagg tactgtcctc tactacgaga aggaaatagg
     501  ctgtttgttg agagcccatt ccatagaggc ctacgaacct gaagaagtag
     551  tcgggaagac ttttgatacg gttaccttcg ttactgctga aaatcatata
     601  cctgcagaag cgcgacactt ggtttaccag tgtctcacac gacaccgttc
     651  agtgctacat cttatgactc ctgatgcctc ttacacctcc acctga