Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus mRNA for coat protein (ORF4 gene), isolate Tz15

ACC No: AJ885156

Dated: 2005-06-23 | Length: 720 | CRC: -226001916

                !!NA_SEQUENCE 1.0
ID   AJ885156   standard; mRNA; VRL; 720 BP.
XX
AC   AJ885156;
XX
SV   AJ885156.1
XX
DT   23-JUN-2005 (Rel. 84, Created)
DT   23-JUN-2005 (Rel. 84, Last updated, Version 1)
XX
DE   Rice yellow mottle virus mRNA for coat protein (ORF4 gene), isolate Tz15
XX
KW   coat protein; cp gene; ORF4.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (17-FEB-2005) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., Dgpc, Ird, BP64501, 34394 Montpellier cedex 5, FRANCE.
XX
RN   [2]
RA   Traore O., Sorho F., Pinel A., Abubakar Z.;
RT   "Processes of diversification and dispersion of Rice yellow mottle virus
RT   inferred from large-scale and high resolution phylogeographic studies";
RL   Mol. Ecol. 0:0-0(0).
XX
RN   [3]
RA   Traore O., Sorho F., Pinel A., Abubakar Z., Banwo O., Maley J., Hebrard E.,
RA   Winter S., Sere Y., Konate G., Fargette D.;
RT   "Processes of diversification and dispersion of Rice yellow mottle virus
RT   inferred from large-scale and high resolution phylogeographic studies";
RL   Mol. Ecol. 14(7):2097-2110(2005).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /country="Tanzania"
FT                   /db_xref="taxon:31744"
FT                   /mol_type="mRNA"
FT                   /virion
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Tz15"
FT   CDS             1. .720
FT                   /evidence=EXPERIMENTAL
FT                   /note="ORF4"
FT                   /product="coat protein"
FT                   /protein_id="CAI59703.1"
FT                   /translation="MARKGKKISSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRVSG
FT                   TVPGPLSSSSWPVHSVEFLMDFKRSATSAEATTFNCVPFNLPRVWSLARCYSLWKPTRW
FT                   DVIYLPEVSAATAGSIEMCYLYDYADAIPSDTGKMSRTAGFVTSSVWYGAEGCHLLSGG
FT                   TARNAVVASMDCSRVGWRRVTSSIPSSVDPNVVNTILPARLAVRSSIKPTVDDVPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 154 A; 194 C; 216 G; 156 T; 0 other;

  AJ885156  Length: 720  June 28, 2005 08:34  Type: N  Check: 7523  ..

       1  atggccagga agggcaagaa aatcagctcc aaccagggcc agcaaggaaa
      51  gaagaagagt cggcgtcccc gtgggcgttc ggcggagccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccgggtat ctgggacggt tcctggtcca
     151  ctatcttcta gctcctggcc ggtccactcc gtggaattcc taatggattt
     201  taagcggagt gccacatcag cagaagcgac gacattcaac tgtgtgccgt
     251  tcaatctgcc tcgggtgtgg agtcttgcgc gttgttactc actgtggaag
     301  ccaacacggt gggatgtcat ctacctccct gaggttagtg cggcgacagc
     351  tggaagtatt gagatgtgct atctctacga ctacgctgac gccattccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctctagcgtt
     451  tggtacggcg ctgagggctg ccacttgttg agtggcggca cagcacgaaa
     501  tgccgtggtc gcctcgatgg attgctctcg agtcggctgg agacgcgtta
     551  ctagttcaat acctagtagc gtggatccca acgtcgtaaa caccatactg
     601  ccagcaaggc tagctgtgcg gtcgtcgatc aaaccgacgg ttgatgatgt
     651  gccggggaaa ctctacgcca tcgtcagtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga