Sequence of DPV Tomato yellow leaf curl Yunnan alphasatellite
Tomato yellow leaf curl China virus associated DNA 1 rep gene for replication-associated protein, isolate Y241
ACC No: AJ888452
Dated: 2005-06-28 | Length: 1362 | CRC: 381830750
!!NA_SEQUENCE 1.0
ID AJ888452 standard; circular genomic DNA; VRL; 1362 BP.
XX
AC AJ888452;
XX
SV AJ888452.1
XX
DT 28-JUN-2005 (Rel. 84, Created)
DT 28-JUN-2005 (Rel. 84, Last updated, Version 1)
XX
DE Tomato yellow leaf curl China virus associated DNA 1 rep gene for
DE replication-associated protein, isolate Y241
XX
KW rep gene; replication-associated protein.
XX
OS Tomato yellow leaf curl China virus associated DNA 1
OC Viruses; Satellites; Satellite Nucleic Acids;
OC Begomovirus-associated DNA 1-like sequences.
XX
RN [1]
RP 1-1362
RA Zhou X.;
RT ;
RL Submitted (28-FEB-2005) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Zhejiang University, Huajiachi, Institute of Biotechnology,
RL Kaixuan Road 268, Hangzhou, Zhejiang, 310029, CHINA.
XX
RN [2]
RA Zhou X.;
RT "Genomic variation of nanovirus-like DNA molecules associated with their
RT begomovirus-satellite complexes";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1362
FT /country="China:Yunnan"
FT /db_xref="taxon:240557"
FT /mol_type="genomic DNA"
FT /virion
FT /organism="Tomato yellow leaf curl China virus associated
FT DNA 1"
FT /isolate="Y241"
FT /isolation_source="tobacco"
FT CDS 85. .1032
FT /gene="rep"
FT /product="replication-associated protein"
FT /protein_id="CAI59923.1"
FT /translation="MPCVQSQWWCFTVFFLTATAPDLVPLLENTHVSYACWQEEESPTT
FT KRRHLQGYLQLKGKRSFNQVKALFGDLKPHLEKQRARKTDEACDYCMKEETRVSGPFEF
FT GDYCPSGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFKATVAEIQISNLKSW
FT QLRLRTLLDRAPDDRTIFWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSGDNVSYQYIG
FT CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLVNCIHVVVMSNFLPDF
FT EKISSDRVHVIPCIPCGSCLKHHITEIKCNEYLD"
XX
SQ Sequence 1362 BP; 399 A; 231 C; 323 G; 409 T; 0 other;
AJ888452 Length: 1362 July 5, 2005 08:57 Type: N Check: 8895 ..
1 acccagcctc ggttccctct ccttggttcc ctcgtgcctt ccgcgtgctc
51 tctctcttct gtgttctttt ataaaaaaaa taaaatgcct tgtgttcaat
101 ctcagtggtg gtgtttcacg gtgttcttct taactgcaac tgcacctgac
151 ttggtgccgt tgcttgagaa cacccatgtc tcgtatgctt gctggcagga
201 ggaggaatct ccgacgacga aacgtcgtca tctccagggg tatctgcaat
251 tgaagggtaa acgtagtttc aaccaggtga aggccctatt tggggatttg
301 aaaccccatc ttgagaaaca gcgagctcgt aagacagacg aagcttgcga
351 ctattgtatg aaagaggaaa ctagggtttc cggtcccttt gaatttgggg
401 attattgccc tagtggttct cataaacgcc gtcaaagaga aagtgtaatt
451 cgaagtccgg tgagaatggc ggaggagaat ccgtccgtat tccgtcgtgt
501 gaaggcaaag attgcggagg aagaattcaa ggctactgta gctgaaattc
551 aaatttcaaa tttgaaatct tggcaactgc gcctaaggac gctcctcgac
601 agggctccag atgaccgcac tatcttctgg gtgtatggtc ccactggtgg
651 ggaaggcaaa tcaacgtttg ctagagacct gtatagaagt gggtcttggt
701 tttatacacg tggcggttct ggagataatg ttagttatca gtatataggt
751 tgtttaggaa ataatattgt atttgatatc cctcgtgata agaaggatta
801 tctgcaatat agtttaatag aaatgtttaa ggataggtta attgttagta
851 acaagtacga gcctcttatg gccccacttg ttaattgtat tcatgttgta
901 gttatgtcta attttcttcc tgattttgag aagattagca gtgatagggt
951 ccatgtaatt ccttgtattc cttgtggttc ttgtcttaag catcacatta
1001 ctgaaataaa atgcaacgag tatttggact aaatacgagt ataaatatac
1051 gtatattttg cttctttaag aaaagaagga atgaaatgaa aataaaataa
1101 gaataatatg cagaacatta atagcttgaa gaaagtaggc cccgcagggg
1151 cattgttcta aattgatata aaataaaaga aaaaagaaaa agggaaaatt
1201 aaattataag ggtttattaa aacggtgacg ttttggaagg tttgactggg
1251 tcaaaataaa tgagggacta aagttgaaat agatgggagt ttaggtcctt
1301 cctttgcaat tattcgggat cctaggatat aaataacacg tcaccgaggc
1351 tggtgtagta tt