Sequence of DPV Agropyron mosaic virus

Agropyron mosaic virus partial gene for polyprotein, genomic RNA, isolate Ger

ACC No: AJ889240

Dated: 2007-03-21 | Length: 1810 | CRC: -1571294701

                
ID   AJ889240; SV 1; linear; genomic RNA; STD; VRL; 1810 BP.
XX
AC   AJ889240;
XX
DT   21-MAR-2007 (Rel. 91, Created)
DT   21-MAR-2007 (Rel. 91, Last updated, Version 1)
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DE   Agropyron mosaic virus partial gene for polyprotein, genomic RNA, isolate
DE   Ger
XX
KW   polyprotein.
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OS   Agropyron mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Rymovirus.
XX
RN   [1]
RP   1-1810
RA   Adams M.J.;
RT   ;
RL   Submitted (08-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Shi Y.H., Hong X.Y., Chen J., Adams M.J., Zheng H.Y., Lin L., Qing B.X.,
RA   Chen J.;
RT   "Detection and classification of potyviruses from China and elsewhere";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1810
FT                   /organism="Agropyron mosaic virus"
FT                   /isolate="Ger"
FT                   /mol_type="genomic RNA"
FT                   /country="Germany"
FT                   /virion
FT                   /db_xref="taxon:41763"
FT   CDS             <1. .1638
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="CAI65408.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAMQYAIAKHGLSPESTDSFIRYFANG
FT                   DDLVIAIAPEKADLLDTLAQSFGELGLHYDFSSRVEKREDLWFMSHQGKLINDMYIPML
FT                   ERERVVAILEWDRSHEPEFQMDAINAAIIESWGDDELIYQVRKYYNWLLEQEPYKSLAD
FT                   AGKAPYLAETALTKLYTDVDASQEILDLYQNYVIELPQFDEPTLVYHEADDQQNSQNNP
FT                   SSEDNKTNPQTGDGQQTPAADQQQNKANTENTENQQNAANQQQNRTTENAQKAANDDKS
FT                   KQLAKAQSKEVVRQNNEKRVMNSGGDDADVTIKDEAKTFVIPKVEVLNKKLRMPKFKGK
FT                   AMVNVDHLLVYKPDQRDLSNKRATQRQVDNWVEKVAKDYGVEESSMDIIINGFMVWALD
FT                   NGTSPNITGTWIMMDKEEQREYPIEPLVRHAQPTLRQIMMHLSDTATGYIVLRNTKERY
FT                   MPGYGLKRNLNDMSLAPYAFDFYEITSETPNRVREAHLQMKAAAIRGKVNRTFGLDGTV
FT                   SSGSEDTERHTVDDVKHGTHSFYGAGMN"
FT   mat_peptide     <1. .633
FT                   /product="NIb polymerase"
FT   mat_peptide     634. .1635
FT                   /product="coat protein"
XX
SQ   Sequence 1810 BP; 573 A; 370 C; 438 G; 429 T; 0 other;

aj889240 Length: 1810  21-MAR-2007  Type: N  Check: 2335  ..

       1  gggaacaaca gcgggcaacc atctacagtt gtcgacaaca cactaatggt
      51  tgtcttggct atgcaatatg ctatagcgaa acacggtctt agtccagagt
     101  caacggatag ttttatccgg tactttgcta atggtgatga cttggttata
     151  gcaattgctc cggaaaaagc ggatttgtta gatacacttg cacagagctt
     201  tggtgaactt ggcttacatt atgatttttc atcacgggtg gagaaaagag
     251  aagatctttg gttcatgtca caccagggca agcttatcaa tgacatgtat
     301  atccctatgc ttgaaagaga acgtgttgta gccatattgg aatgggatcg
     351  aagccatgaa cctgagtttc aaatggatgc aattaatgct gcaataattg
     401  aatcctgggg agatgatgag ttgatctatc aagttcggaa gtactacaac
     451  tggttacttg agcaagagcc atacaaatcc ctcgcagatg ctggaaaggc
     501  tccttacctt gctgagacag cactcacaaa attgtacaca gatgtcgacg
     551  cttcacaaga aattctggat ttataccaaa attatgtcat tgaactccca
     601  cagttcgatg agccaactct tgtgtaccac gaggcagacg atcaacaaaa
     651  ttctcagaac aatccttcaa gcgaggacaa caagacaaac ccgcagacag
     701  gagacgggca gcaaacccca gcggccgatc agcagcaaaa taaagcaaac
     751  acggagaaca ccgaaaatca acagaacgca gccaatcagc agcaaaaccg
     801  aacgacggag aatgctcaaa aagcggccaa cgatgacaaa tcaaagcagt
     851  tggcaaaagc acagtcgaaa gaggttgttc ggcaaaacaa tgaaaagcgg
     901  gtgatgaact ctggcggcga tgatgcggat gtcacaatca aggacgaagc
     951  aaaaactttc gtcataccga aggtcgaggt tttgaacaag aagctccgca
    1001  tgccaaaatt caaagggaaa gccatggtaa atgtagatca tttattggtt
    1051  tacaaaccag atcagaggga tctttccaac aaacgtgcaa cccaaagaca
    1101  agtggataat tgggttgaaa aggtggcgaa agactatggt gttgaagaat
    1151  ctagcatgga cataataata aatggtttca tggtttgggc tcttgataat
    1201  gggacttccc caaacatcac gggcacctgg atcatgatgg ataaggagga
    1251  acaacgtgaa tatccgattg aaccacttgt tcgccatgct caaccaacgc
    1301  tgcgtcaaat tatgatgcat cttagtgaca cagcgactgg gtacatagtt
    1351  ttacgtaaca ctaaagaaag gtatatgcct gggtatggat taaagcgtaa
    1401  tcttaatgat atgagcttgg ctccatatgc cttcgacttc tacgaaataa
    1451  catccgaaac tccaaatcgt gtgcgtgagg cgcacttgca gatgaaggcc
    1501  gcggctattc gcggtaaggt taataggact ttcggactcg atggtactgt
    1551  ttctagtgga agtgaggaca ctgagcgtca cacggttgac gatgtcaaac
    1601  atggcactca ttcattctac ggagctggaa tgaactgagt tcatatgtat
    1651  ccaataatca gtgtcgtaaa aggccccaga aaatctttct ctgtctgccg
    1701  tgatttgcgt ggttaccacg attgtcatgg acggattcac cggatggttt
    1751  caggcgtaat gcgagagtgt tttaacacga gggcatgaaa cttgttgctg
    1801  tgatggagag