Sequence of DPV Bean common mosaic virus

Bean common mosaic virus partial gene for polyprotein, genomic RNA, strain Peanut stripe virus

ACC No: AJ889245

Dated: 2007-03-21 | Length: 1749 | CRC: -1489973597

                
ID   AJ889245; SV 1; linear; genomic RNA; STD; VRL; 1749 BP.
XX
AC   AJ889245;
XX
DT   21-MAR-2007 (Rel. 91, Created)
DT   21-MAR-2007 (Rel. 91, Last updated, Version 1)
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DE   Bean common mosaic virus partial gene for polyprotein, genomic RNA, strain
DE   Peanut stripe virus
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KW   polyprotein.
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OS   Bean common mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1749
RA   Adams M.J.;
RT   ;
RL   Submitted (08-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
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RN   [2]
RA   Shi Y.H., Hong X.Y., Chen J., Adams M.J., Zheng H.Y., Lin L., Qing B.X.,
RA   Chen J.;
RT   "Detection and classification of potyviruses from China and elsewhere";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1749
FT                   /organism="Bean common mosaic virus"
FT                   /specific_host="groundnut"
FT                   /strain="Peanut stripe virus"
FT                   /isolate="Hangzhou"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang: Hangzhou"
FT                   /virion
FT                   /db_xref="taxon:12196"
FT   CDS             <1. .1497
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="CAI65413.1"
FT                   /translation="GNNSGQPSTVVDNTLTVVMSVYYSCHKVGWSDEDIQRRLVFFANG
FT                   DDIILSVQETDLWVLDTFTKSFGELGLNYDFSERTRRREDLWFMSHCAIQVDGIYIPKL
FT                   EPERVVSILEWDRSKEMMHRTEAICAAMIEAWGYPELLQEIRKFYLWLLERDELKEIAA
FT                   NGGAPYIAESALKTLYTNKRTRIEELAKYLAVLDFDYEVGCGESVHLQSGSSTTQSPVL
FT                   DAGVDTAKDKKEKSNKGKGPESSEGSGNNSRGTDNQSMRDKDVNAGSKGKIVPRLQKIT
FT                   KRMNLPMVKGNVILNLDHLLDYKPEQTDLFNTRATKMQFEMWYNAVKGEYEIDDEQMSI
FT                   VMNGFMVWCIDNGTSPDVNGTWVMMDGDEQVEYPLKPMVENAKPTLRQIMHHFSDAAEA
FT                   YIEMRNSERPYMPRYGLLRNLRDKNLARYAFDFYEVTSKTSDRAREAVAQMKAAALSNV
FT                   NSKLFGLDGNVATTSENTERHTARDVNQNMHTLLGMGSAQ"
FT   mat_peptide     <1. .633
FT                   /product="NIb polymerase"
FT   mat_peptide     634. .1494
FT                   /product="coat protein"
XX
SQ   Sequence 1749 BP; 552 A; 302 C; 447 G; 448 T; 0 other;

aj889245 Length: 1749  21-MAR-2007  Type: N  Check: 8033  ..

       1  ggcaacaata gtgggcagcc ttccacagtt gtggacaaca cactcacggt
      51  tgtaatgtca gtgtattatt catgtcacaa agtgggatgg agtgatgaag
     101  atattcagag gcgcttagtt ttctttgcca atggggatga catcatactt
     151  tctgtgcaag agacggatct ctgggtcctt gacacattca ctaaatcatt
     201  tggggagctt ggcctgaatt atgatttcag tgagagaaca agaaggaggg
     251  aagatctctg gttcatgtca cactgtgcaa ttcaagttga tggaatatac
     301  attccaaagt tagaaccaga gcgtgtggtt tcaattctag agtgggacag
     351  gagtaaagaa atgatgcaca ggactgaagc aatctgtgca gcaatgattg
     401  aagcatgggg ctatcctgaa ttgctccagg agattaggaa attttatttg
     451  tggctgcttg agagagatga actaaaagaa atagcagcta atggaggagc
     501  tccgtacata gcagaatcag cactaaaaac actttacacc aacaaaagaa
     551  caagaattga agagttggca aagtatttgg ctgtgcttga ttttgactat
     601  gaagttggat gcggagaatc tgtgcatcta cagtcaggga gcagcacaac
     651  acaatcacca gtgttggatg ctggcgtgga tactgccaag gacaagaaag
     701  agaagagcaa caaaggaaaa ggtcctgaaa gcagtgaagg gtcaggtaac
     751  aatagtcgtg gaacagataa tcaatcaatg agagacaagg atgtgaatgc
     801  tggttcaaaa ggaaagattg ttcctcggct tcagaagatc acaaagagaa
     851  tgaatttgcc aatggtgaaa gggaatgtga tcttgaattt agatcatctt
     901  ttggattaca agccagagca aactgatctt ttcaacacaa gagcaacaaa
     951  gatgcagttt gaaatgtggt acaatgctgt gaagggcgag tatgaaatag
    1001  atgatgaaca gatgtcaatt gtgatgaacg gctttatggt gtggtgtatt
    1051  gacaatggca cttcaccgga tgtaaatgga acatgggtga tgatggacgg
    1101  agacgagcaa gtggaatatc ctctcaaacc aatggttgag aatgcaaaac
    1151  ctacacttcg tcaaatcatg caccatttct cagatgcagc tgaagcatac
    1201  attgagatga gaaattctga gcgaccatac atgcctaggt atggattgct
    1251  tcggaatttg agggataaaa atctagctcg ctacgctttc gacttctatg
    1301  aagtgacttc caagacatca gatcgtgcaa gggaagcagt agcacagatg
    1351  aaggcagcag ccctcagcaa tgttaacagc aagttgtttg gacttgatgg
    1401  gaatgtggca acaaccagcg agaatactga aaggcacact gcaagggacg
    1451  ttaatcagaa catgcacaca cttcttggca tgggttctgc gcagtagaga
    1501  ttgggtcaac cgatcacagt tagcatctcg cgtcgctgaa tagtatcata
    1551  tagtaatctt ttatgttctc tttagtttca gtgtggtttt accaccatta
    1601  ttaactattg tgatagtgtg gttggtccac caacatattg cgagtacttt
    1651  atgtttatga gtaagccgga agaaccattg caatagcgag ggcatgcaga
    1701  gtgattctat catgtgtcat gagatagcta cggcaatgct tgttgttcc