Sequence of DPV Papaya ringspot virus
Papaya ringspot virus P partial gene for polyprotein, genomic RNA, isolate VNP-Tuyenquang2
ACC No: AJ971945
Dated: 2005-05-25 | Length: 1551 | CRC: 1631666427
!!NA_SEQUENCE 1.0
ID AJ971945 standard; genomic RNA; VRL; 1551 BP.
XX
AC AJ971945;
XX
SV AJ971945.1
XX
DT 25-MAY-2005 (Rel. 83, Created)
DT 25-MAY-2005 (Rel. 83, Last updated, Version 1)
XX
DE Papaya ringspot virus P partial gene for polyprotein, genomic RNA, isolate
DE VNP-Tuyenquang2
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KW NIB; nuclear inclusion body; polyprotein.
XX
OS Papaya ringspot virus P
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1551
RA Chu H.H.;
RT ;
RL Submitted (25-MAY-2005) to the EMBL/GenBank/DDBJ databases.
RL Chu H.H., Plant Cell Technology, Institute of Biotechnology (IBT), Hoang
RL Quoc Viet Str. 18, Cau Giay, Hanoi, 10000, VIET NAM.
XX
RN [2]
RA Chu H.H., Nguyen H.M., Pham V.T., Le B.T.;
RT "Sequence varieties in the Nib gene of Papaya ringspot virus isolation from
RT multiple location in Vietnam";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1551
FT /country="Viet Nam:Tuyenquang province"
FT /db_xref="taxon:12206"
FT /mol_type="genomic RNA"
FT /organism="Papaya ringspot virus P"
FT /isolate="VNP-Tuyenquang2"
FT /specific_host="Carica papaya"
FT CDS <1. .>1551
FT /codon_start=1
FT /db_xref="GOA:Q4VYE9"
FT /db_xref="UniProtKB/TrEMBL:Q4VYE9"
FT /product="NIB"
FT /protein_id="CAI98966.1"
FT /translation="SGSRWLFDKLHGNLKGVSSAPSNLVTKHVVKGICPLFRNYLECDE
FT EAKTFFSPLMGHYMKSVLSKEAYVKDLLKYSSEIIVGEVDHDVFEESVAQVVELLNVHE
FT CPELEYVTDSEVIVQALNMDAAVGALYTGKKRKYFEGSTVEHRQALVRKSCECLYEGRM
FT GVWNGSLKAELRPAEKVLAKKTRSFTAAPLDTLLGAKVCVDDFNNWFYSKNMECPWTVG
FT MTKFYKGWDEFLRKFPDGWIYCDADGSQFDSSLTPYLLNAVLSIRLWAMEDWDVGAQVL
FT KNLYGEITYTPILTPDGTIVKKFKGNNSGQPSTVVDNTLMVLITMYYALRKAGYDTKAQ
FT EDMCVFYINGDDLCIAIHPDHEHVLDSFSSSFAELGLKYDFTQRHRNKQNLWFMSHRGI
FT LVDDIYIPKLEPERIVAILEWDKSKLPEHRLEAITAAMIGSWGYEELTHQIRRFYQWVL
FT EQAPFTELAKQGRAPYVSEVGLRRLYTSKRGSMYELEAYIDKYFEREKGDSPELLVYHE
FT "
FT mat_peptide <1. .>1551
FT /product="NIB"
XX
SQ Sequence 1551 BP; 458 A; 266 C; 386 G; 441 T; 0 other;
AJ971945 Length: 1551 December 20, 2005 16:48 Type: N Check: 2890 ..
1 agtggaagtc gatggctttt tgacaagtta cacggcaacc ttaaaggagt
51 gagctcggcg cctagcaatt tagtcacgaa gcacgttgtg aaaggaatct
101 gtcctctctt caggaattac cttgagtgtg atgaagaagc taagactttc
151 tttagtccgc ttatgggaca ctacatgaag agcgttctaa gcaaggaagc
201 atatgtaaag gatttattga aatattcaag cgagataatt gttggtgaag
251 ttgaccacga cgtgttcgag gaaagcgttg cgcaagttgt tgagttgcta
301 aatgtccatg agtgtcctga actcgaatac gtcacagata gcgaagtcat
351 tgtacaagct ttaaatatgg atgctgctgt tggagctttg tacacaggaa
401 agaaaagaaa atattttgaa ggatcaacgg ttgagcacag acaagcctta
451 gtgcgaaaga gttgtgaatg cctgtatgaa ggccggatgg gtgtttggaa
501 tggatcgcta aaagctgagc tgcggcctgc agagaaagtc ttagccaaaa
551 agacaagatc ttttactgcg gcacctctcg acactttgtt gggagctaaa
601 gtttgtgttg atgatttcaa taattggttc tacagcaaaa acatggaatg
651 tccttggact gttggcatga caaagtttta caaaggctgg gatgaatttt
701 tgagaaaatt tcctgatggt tggatttatt gcgatgcaga tggatcccag
751 tttgatagct ctttgacacc atacttgcta aatgctgtgt tgtcaattcg
801 attgtgggct atggaagatt gggatgttgg agctcaagtg cttaagaact
851 tatacggaga aataacatat acccctattt taacacccga tgggacgatt
901 gtcaagaaat tcaaagggaa taatagtggt cagccttcga cagttgtcga
951 taacacacta atggttttaa tcacaatgta ttatgcgtta cgcaaggctg
1001 gttacgacac gaaggctcag gaggatatgt gtgtgtttta tatcaatggc
1051 gatgatctct gtattgccat tcacccggat catgaacatg ttcttgactc
1101 attttctagc tcattcgctg agcttggact taaatatgat ttcactcaaa
1151 ggcaccgaaa taaacaaaat ttgtggttca tgtcgcatcg aggtattctg
1201 gtcgatgaca tttatattcc taaacttgaa ccagaaagaa ttgtagctat
1251 tcttgagtgg gacaaatcta aactcccaga acaccgattg gaagctatta
1301 cagcagcaat gataggatca tggggctatg aggagttaac gcaccagatc
1351 cgtaggttct atcaatgggt gcttgagcaa gctccattca ctgaattagc
1401 gaagcagggc agagctccgt atgtgtctga ggttggatta aggcgcctat
1451 ataccagtaa gcgtggttca atgtatgagt tggaagccta catagataaa
1501 tattttgagc gggaaaaggg agattcacct gagttactgg tatatcatga
1551 a