Sequence of DPV Malvastrum yellow mosaic alphasatellite
Sida leaf curl virus-associated DNA 1 complete genome, isolate Hn60
ACC No: AM050735
Dated: 2006-09-28 | Length: 1379 | CRC: 1778883482
ID AM050735; SV 1; circular; genomic DNA; STD; VRL; 1379 BP.
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AC AM050735;
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DT 05-DEC-2005 (Rel. 86, Created)
DT 28-SEP-2006 (Rel. 89, Last updated, Version 5)
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DE Sida leaf curl virus-associated DNA 1 complete genome, isolate Hn60
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KW complete genome; rep gene; replication protein.
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OS Sida leaf curl virus-associated DNA 1
OC Viruses; Satellites; unclassified Satellites;
OC Begomovirus-associated DNA 1-like sequences.
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RN [1]
RP 1-1379
RA Zhou X.;
RT ;
RL Submitted (21-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268,
RL Hangzhou, Zhejiang, 310029, CHINA.
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RN [2]
RA Guo X.J., Zhou X.P.;
RT "Characterization of a new begomovirus infecting Sida cordifolia and its
RT associated satellite DNA molecules";
RL Unpublished.
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RN [3]
RA Guo X., Zhou X.;
RT "Molecular characterization of a new begomovirus infecting Sida cordifolia
RT and its associated satellite DNA molecules";
RL Virus Genes 33(3):279-285(2006).
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FH Key Location/Qualifiers
FH
FT source 1. .1379
FT /organism="Sida leaf curl virus-associated DNA 1"
FT /isolate="Hn60"
FT /mol_type="genomic DNA"
FT /country="China:Hainan"
FT /virion
FT /db_xref="taxon:337825"
FT CDS 76. .1023
FT /transl_table=1
FT /gene="rep"
FT /product="replication protein"
FT /db_xref="GOA:Q2WCK8"
FT /db_xref="InterPro:IPR000605"
FT /db_xref="InterPro:IPR003365"
FT /db_xref="UniProtKB/TrEMBL:Q2WCK8"
FT /protein_id="CAJ19261.1"
FT /translation="MPSLKSTFWCFTVFFTASSAPDLVPLFENTHVSYACWQEEESPTT
FT RRRHLQGYLQLKGERTLNQVKSIFGDLKPHLEKQRARKTDEACDYCMKEETRVSGPFEF
FT GDYCPSGSHKRRQRESVIRSPVRMAEENPSLFRRVKAKIAEEDFQKTAREIEILNLKSW
FT QLRLRTLLDRAPDDRTIFWVYGPTGGEGKSTFARDLYRSGSWFYTRGGSADNVGYQYIG
FT CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFMPDF
FT EKISQDRVHVIPCRPCGVCLKHHMMEIKCEEYVD"
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SQ Sequence 1379 BP; 412 A; 260 C; 324 G; 383 T; 0 other;
am050735 Length: 1379 28-SEP-2006 Type: N Check: 4216 ..
1 acccagcctt gcgaccctga gcttacgacc ctcgtgcgat tcacgtgatt
51 tctttctctt ttccttagaa aaaatatgcc ttcccttaaa tctacattct
101 ggtgtttcac cgtcttcttc actgcctctt ctgcccctga tctggtgcct
151 ctcttcgaaa acacccacgt tagttacgcc tgctggcaag aggaagagtc
201 tcccacgact cgacgacgcc acttgcaggg gtatctccaa ttgaagggtg
251 agagaacctt gaaccaggtg aagtcgatat tcggtgacct gaaaccccac
301 ctggagaaac agcgagctcg taagacagac gaagcttgcg actattgtat
351 gaaagaggaa actagggttt ccggtccctt tgaatttggg gattattgcc
401 ctagtgggtc ccacaaacgc cggcagagag aatcggtaat tcgaagtccg
451 gtgagaatgg ccgaagagaa cccatctctt ttccgacgag tgaaggcaaa
501 gattgcggaa gaagatttcc agaagactgc gcgggagatc gaaattttga
551 atttgaaatc ctggcaattg cgcctgagga cgctcctcga cagggcccca
601 gatgaccgca ctatcttctg ggtgtatggt cccactggtg gagaagggaa
651 atcgacattc gcgcgagacc tgtacagaag tgggtcctgg ttctatacac
701 gtggaggatc tgcagataac gttggttatc agtatatagg ttgtttagga
751 aataatattg tatttgatat ccctcgtgat aagaaggatt atctacaata
801 tagcttaata gagatgttta aggataggct aatagttagt aataagtatg
851 agcctttgat ggctccgtta attaattgta ttcatgtagt tgttatgtct
901 aattttatgc ctgactttga gaagattagt caggatagag tccatgtaat
951 tccctgtaga ccttgtggtg tttgtcttaa acaccacatg atggaaataa
1001 aatgcgagga atatgtggat taatttatgt tttgtttctt ttaagtaaaa
1051 gaaagaatga aatgaaaaaa aaaaataaat gaataatctc cctcctattt
1101 catttgaata agaagtgccg cgcagcggca ttcaaaaaaa taaaaacaaa
1151 aatgaaaaaa aaacaacata tattatttat ttgaacttac aaaacgacgt
1201 cgtactcatc ttctagctgg ggcagaaata taaatatgtg atagttgcgt
1251 gcttgcggaa caaaaactga aaaagatgcg gttaggcgga gtaaatatgt
1301 gggtctatag gggtatgcgt gtgcaatttt aaaggtcgat aggatatata
1351 tagcacgtca gcaaggctgg tgtagtatt