Sequence of DPV Colombian datura virus

Colombian datura virus gene for polyprotein, genomic RNA, clone 2, isolate Hungary

ACC No: AM113757

Dated: 2006-05-19 | Length: 1632 | CRC: 1988073168

                
ID   AM113757   standard; genomic RNA; VRL; 1632 BP.
XX
AC   AM113757;
XX
SV   AM113757.1
XX
DT   19-MAY-2006 (Rel. 87, Created)
DT   19-MAY-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Colombian datura virus gene for polyprotein, genomic RNA, clone 2, isolate
DE   Hungary
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Colombian datura virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1632
RA   Schubert J.L.;
RT   ;
RL   Submitted (12-OCT-2005) to the EMBL/GenBank/DDBJ databases.
RL   Schubert J.L., Institute of Resistance Research, Federal Centre for
RL   Breeding Research, Theodor-Roemer-Weg 4, D-06449 Aschersleben, GERMANY.
XX
RN   [2]
RA   Schubert J., Doroszewska T., Chrzanowska M., Sztangret-Wisniewska J.;
RT   "Natural Infection of Tobacco by Colombian Datura virus in Poland, Germany
RT   and Hungary";
RL   J. Phytopathol. 154(6):343-348(2006).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1632
FT                   /organism="Colombian datura virus"
FT                   /isolate="Hungary"
FT                   /mol_type="genomic RNA"
FT                   /country="Hungary"
FT                   /isolation_source="Nicotiana tabacum cv. TN86, Burley type"
FT                   /clone="2"
FT                   /virion
FT                   /db_xref="taxon:91613"
FT   CDS             <1. .1393
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /protein_id="CAJ34666.1"
FT                   /translation="IAMFYAMHSRDIPKESVRFYVNGDDLLIAIEPQYEDELKHFQALF
FT                   LELGLIYTFDDITKDRSDVEFMSHKAVLREGIYIPKLEPERIVSILEWDRSGEPSHRLE
FT                   AICASIIESWGYDELTKRIRMFYLWILEQAPYKQLAEEGRAPYLAETALRKLYLDAEPT
FT                   ESELLKYAGCIRGDYDDSLASEDIYLQADKVDAGSNTQAGKNQSKEDTSVVTTGERKDL
FT                   VAKQDRDVNAGSSGTFSVPRIKAIPTKMNLPKIKNKQVISLDHLLNYKPEQHDISNTRA
FT                   THQQFEQWHNRVRDAYEVTDEQMQIILNGLMVWCIENGTSPNIHGVWTMMDGEEQVEYA
FT                   LKPIIENAQPTFRQIMAHFSDLAEAYIEMRNRDRAYMPRYGLQRNLTDMSLSRYAFDFY
FT                   EVTPRTPTRAREAHMQMKAAAIRNNTTKLFGLDGNVSTAEEDTERHTAQDVNRGMHTLL
FT                   GVRQG"
FT   mat_peptide     <1. .570
FT                   /product="NIb protein"
FT   mat_peptide     571. .1390
FT                   /product="coat protein"
FT   3'UTR           1394. .1632
XX
SQ   Sequence 1632 BP; 494 A; 329 C; 369 G; 440 T; 0 other;

am113757 Length: 1632  19-MAY-2006  Type: N  Check: 5820  ..

       1  catagccatg ttttacgcca tgcactcacg tgacattccg aaagagtccg
      51  tgagatttta tgttaatgga gatgatctgc tcattgctat agagccacag
     101  tatgaagacg agttgaagca ctttcaagct ttattcttag aactcggtct
     151  tatttatact tttgatgaca ttacaaaaga ccgcagtgat gtggaattta
     201  tgtcacacaa ggctgttctc agagaaggta tttacatacc taaacttgaa
     251  ccagagcgga ttgtttccat tcttgaatgg gacagatcag gagaaccatc
     301  tcatcggctg gaagccatct gtgcaagcat catagagtcg tggggctatg
     351  atgaactaac taagaggatc agaatgtttt atctttggat tctcgaacaa
     401  gcaccctaca aacaacttgc tgaagaaggt agagctcctt acctagctga
     451  aactgctctg cgcaagttgt accttgatgc tgaacccact gaatcggaat
     501  tgcttaaata tgcagggtgc atcagaggtg attatgatga tagcttggca
     551  tctgaagata tatatctcca agctgataaa gttgatgccg gtagtaacac
     601  acaagccgga aagaaccagt caaaagaaga cacaagtgtt gtcacgactg
     651  gagagagaaa ggatcttgtc gctaaacaag atcgagatgt gaatgctggt
     701  tctagtggaa cctttagtgt acctcgcatt aaagcaattc ctactaagat
     751  gaacctaccc aagatcaaga ataaacaggt tattagtctg gaccatctgc
     801  tgaactacaa accagaacaa catgatatct caaacacaag ggccacacac
     851  caacaatttg aacagtggca caatcgtgta cgagatgctt atgaagttac
     901  tgatgaacag atgcagataa tcttgaatgg attaatggtt tggtgtatcg
     951  aaaatggtac atcaccaaac atacatggtg tctggactat gatggatggg
    1001  gaggaacagg ttgagtatgc attaaagccc atcattgaaa atgctcaacc
    1051  cacatttcgc caaataatgg cgcattttag cgatctagcg gaggcttata
    1101  ttgaaatgag gaacagggat cgcgcctaca tgccacgtta cgggctacag
    1151  cgcaatctta ctgacatgag tctgagccgc tatgcatttg acttttacga
    1201  ggttactccg cggacgccaa cccgtgctcg tgaagctcat atgcagatga
    1251  aagctgcagc aattcgaaac aacacaacga agttatttgg tttggatggg
    1301  aatgtttcaa ctgctgaaga ggataccgaa cgtcacacgg cacaagacgt
    1351  taacagaggt atgcacacat tacttggtgt gcgtcaaggt tagaggttat
    1401  ctttgctttc tgcactttta attactatgt ctatatgtaa tatgtttaac
    1451  actgccacta gccaaccgtt ttgtctcgtg attagtgagg ttcgacctcg
    1501  ttcacattac agaagggcgt tagtcagtat ttacatttca tatcttagta
    1551  tgtactaaaa gtgtctctct acgttcacct ttcagtcgca gtgaggttat
    1601  acctcggaca cggaagtggt tcatagagcg ag