Sequence of DPV Colombian datura virus

Colombian datura virus gene for polyprotein, genomic RNA, clone 13, isolate Poland

ACC No: AM113760

Dated: 2006-05-19 | Length: 1635 | CRC: 1257301442

                
ID   AM113760   standard; genomic RNA; VRL; 1635 BP.
XX
AC   AM113760;
XX
SV   AM113760.1
XX
DT   19-MAY-2006 (Rel. 87, Created)
DT   19-MAY-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Colombian datura virus gene for polyprotein, genomic RNA, clone 13, isolate
DE   Poland
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Colombian datura virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1635
RA   Schubert J.L.;
RT   ;
RL   Submitted (12-OCT-2005) to the EMBL/GenBank/DDBJ databases.
RL   Schubert J.L., Institute of Resistance Research, Federal Centre for
RL   Breeding Research, Theodor-Roemer-Weg 4, D-06449 Aschersleben, GERMANY.
XX
RN   [2]
RA   Schubert J., Doroszewska T., Chrzanowska M., Sztangret-Wisniewska J.;
RT   "Natural Infection of Tobacco by Colombian Datura virus in Poland, Germany
RT   and Hungary";
RL   J. Phytopathol. 154(6):343-348(2006).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1635
FT                   /organism="Colombian datura virus"
FT                   /isolate="Poland"
FT                   /mol_type="genomic RNA"
FT                   /country="Poland"
FT                   /isolation_source="Nicotiana tabacum cv. Wislica, Virginia
FT                   type"
FT                   /clone="13"
FT                   /virion
FT                   /db_xref="taxon:91613"
FT   CDS             <1. .1396
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /protein_id="CAJ34669.1"
FT                   /translation="IAMFYAMHSRDIPKESVRFYVNGDDLLIAIEPQYEDELKHFQALF
FT                   LELGLIYTFDDITKDRSDVEFMSHKAVLREGIYIPKLEPERIVSILEWDRSGEPSHRLE
FT                   AICASIIESWGYDELTKRIRMFYLWILEQAPYKQLAEEGRAPYLADTALRKLYLDAEPT
FT                   ESELLKYAGCIRGDYDDSLASEDIYLQADKVDAGSNTQAGKNQSKEKDTSVVTTGERKD
FT                   LVAKQDRDVNAGSSGTFSVPRIKAIPTKMNLPKIKNKQVISLDHLLNYKPEQHDISNTR
FT                   ATHQQFEQWHNRVRDAYEVTDEQMQIILNGLMVWCIENGTSPNIHGVWTMMDGEEQVEY
FT                   ALKPIIENAQPTFRQIMAHFSDLAEAYIEMRNRDRAYMPRYGLQRNLTDMSLSRYAFDC
FT                   YEVTPRTPTRAREAHMQMKAAAIRNNTTKLFGLDGNVSTAEEDTERHTAQDVNRGMHTL
FT                   LGVRQG"
FT   mat_peptide     <1. .570
FT                   /product="NIb protein"
FT   mat_peptide     571. .1393
FT                   /product="coat protein"
FT   3'UTR           1397. .1635
XX
SQ   Sequence 1635 BP; 496 A; 336 C; 371 G; 432 T; 0 other;

am113760 Length: 1635  19-MAY-2006  Type: N  Check: 2315  ..

       1  catagccatg ttttacgcca tgcactcacg tgacattccg aaagagtccg
      51  tgagatttta cgttaatgga gatgatctgc tcattgctat agagccacag
     101  tatgaagacg agttgaagca ctttcaagct ttattcttag aactcggtct
     151  catttatact tttgatgaca ttacaaaaga ccgcagtgat gtggaattta
     201  tgtcacacaa ggctgttctc agagaaggta tttacatacc taaacttgaa
     251  ccagagcgga ttgtttccat tcttgaatgg gacagatcag gagaaccatc
     301  tcatcggctg gaagccatct gtgcaagcat catagagtcg tggggctatg
     351  atgaactaac taagaggatc agaatgtttt atctttggat tctcgaacaa
     401  gcaccctaca aacaacttgc tgaagaaggg agagctcctt acctagctga
     451  cactgctctg cgcaagttgt accttgatgc tgaacccact gaatcggaat
     501  tgcttaaata tgcagggtgc atcagaggtg attatgatga tagcttggca
     551  tctgaagata tatatctcca agctgataaa gttgatgccg gtagcaacac
     601  acaagccgga aagaaccagt caaaagaaaa agacaccagt gttgtcacga
     651  ctggagagag aaaggatctt gtcgctaaac aagatcgaga tgtgaatgct
     701  ggttctagtg gaacctttag tgtacctcgc attaaagcaa ttcctactaa
     751  gatgaaccta cccaagatca agaataaaca ggttattagt ctggaccatc
     801  tgctgaacta caaaccagaa caacatgata tctcaaacac aagggccaca
     851  caccaacaat ttgaacagtg gcacaatcgt gtacgagatg cttatgaagt
     901  tactgatgaa cagatgcaga taatcttgaa tggattaatg gtttggtgta
     951  tcgaaaatgg tacatcacca aacatacatg gtgtctggac tatgatggat
    1001  ggggaggaac aggttgagta tgcattaaag cccatcattg aaaatgctca
    1051  acccacattt cgccaaataa tggcgcattt tagcgatcta gcggaggctt
    1101  atattgaaat gaggaacagg gatcgcgcct acatgccacg ctacgggcta
    1151  cagcgcaatc ttactgacat gagtctaagc cgctatgcat ttgactgtta
    1201  cgaggttact ccgcggacgc caacccgtgc tcgtgaagct catatgcaga
    1251  tgaaagctgc agcaattcga aacaacacaa cgaagttatt tggtttggat
    1301  gggaatgtgt caactgctga agaggatacc gaacgtcaca cggcacaaga
    1351  cgttaacaga ggtatgcaca cattacttgg tgtgcgtcaa ggttagaggt
    1401  tatctttgct ttctgcactt ttaattacta tgtctatatg taatatgttt
    1451  aacactgcca ctagccaacc gttttgtctc gtgattagtg aggttcgacc
    1501  tcgttcacat tacagaaggg cgttagtcag tatttacatt tcatatctta
    1551  gtatgtacta aaagtgtctc tctacgtcca cctttcagtc gcagtgaggt
    1601  tatacctcgg acacggaagt ggttcataga gcgag