Sequence of DPV Watermelon silver mottle virus

Watermelon silver mottle virus N gene for nucleocapsid protein, genomic RNA

ACC No: AM113762

Dated: 2005-10-13 | Length: 828 | CRC: -709301425

                !!NA_SEQUENCE 1.0
ID   AM113762   standard; genomic RNA; VRL; 828 BP.
XX
AC   AM113762;
XX
SV   AM113762.1
XX
DT   13-OCT-2005 (Rel. 85, Created)
DT   13-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE   Watermelon silver mottle virus N gene for nucleocapsid protein, genomic RNA
XX
KW   N gene; nucleocapsid protein.
XX
OS   Watermelon silver mottle virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-828
RA   Chiemsombat P.;
RT   ;
RL   Submitted (13-OCT-2005) to the EMBL/GenBank/DDBJ databases.
RL   Chiemsombat P., Plant Pathology, Kasetsart University, 1 Malaiman Road,
RL   Khamphaengsaen District, Nakhon Pathom 73140, THAILAND.
XX
RN   [2]
RA   Chiemsombat P., Seetou W., Petsoongnern P., Bhunchoth A., Gajananda O.,
RA   Wongkaew S.;
RT   "Occurrence of tospovirus mixed infection in watermelon and weed plants.";
RL   Unpublished.
XX
RN   [3]
RA   Seetou W.;
RT   "Diagnosis and identification of tospoviruses infecting pepper tomato
RT   watermelon and peanut in Thailand";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .828
FT                   /country="Thailand:Pak Tong Chai"
FT                   /db_xref="taxon:43141"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Watermelon silver mottle virus"
FT                   /isolate="Ph111"
FT                   /isolation_source="Physalis heterophylla leaf tissue"
FT                   /specific_host="Physalis heterophylla"
FT   CDS             1. .828
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="CAJ34671.1"
FT                   /translation="MSNVKQLTEKKIKELLAGGTADVEIETEDSTPEFSFKDFFDNNKN
FT                   IEITFTNCLNILKCRKQIFAACKSGKYNFCGKNIVATSVDVGPEDWTFKRTEAFIRTKI
FT                   VSMVEKTKNEAARQEMYGKIMELPLVAAYGLNVPASYDSCALRMMLCIGGPLPLLSSIR
FT                   GLAPIIFPLAYYQNIKKEKLGIKNFSTYEQVCKVAKVLSASQVEFKDDLDVMFKQAVKI
FT                   LSESNPGTASSISLKKYEDQVKYMDRVFSANLSVDDYGDHSKKSAKPSTSLEV"
XX
SQ   Sequence 828 BP; 275 A; 131 C; 181 G; 241 T; 0 other;

AM113762  Length: 828  October 18, 2005 11:29  Type: N  Check: 5881  ..

       1  atgtctaacg ttaagcagct cacagaaaag aaaattaagg aacttttggc
      51  tggtggtaca gcagatgttg aaattgaaac agaagactcc actcctgaat
     101  ttagcttcaa agattttttt gacaacaaca agaatataga gataactttt
     151  acaaactgct tgaatatcct aaaatgcagg aaacagattt ttgcagcctg
     201  caagagtggt aagtataatt tttgcggtaa aaatattgtt gctacaagtg
     251  ttgatgttgg acctgaagac tggacattca agaggacaga agcttttatc
     301  aggacaaaaa tagttagtat ggtagagaaa accaagaatg aagctgctag
     351  acaggaaatg tatgggaaaa tcatggaact accattagta gctgcttatg
     401  ggttgaatgt gcctgcttct tatgattctt gtgccttgag gatgatgtta
     451  tgtattggag gacctctacc tcttttatct agtataaggg gactggcacc
     501  gattattttc cctttagctt attaccaaaa tataaagaaa gaaaagttag
     551  gtataaagaa cttctccacc tacgagcaag tttgtaaagt ggctaaggtt
     601  ctgtctgctt cacaagttga atttaaggat gatttggatg ttatgttcaa
     651  acaggctgtc aaaatactca gtgagagcaa ccctggaaca gctagctcca
     701  tttcactcaa gaaatatgag gatcaagtta agtacatgga cagggtcttc
     751  agtgctaacc tttctgtgga tgattatggt gatcattcaa agaaaagtgc
     801  aaagcccagc acttctttgg aagtgtaa