Sequence of DPV Pepino mosaic virus

Pepino mosaic virus partial TGBp3 gene for triple gene block protein 3 and CP gene for coat protein, genomic RNA, clone Mu 04.11, isolate 2

ACC No: AM113841

Dated: 2005-12-13 | Length: 804 | CRC: -402393766

                
ID   AM113841   standard; genomic RNA; VRL; 804 BP.
XX
AC   AM113841;
XX
SV   AM113841.1
XX
DT   13-DEC-2005 (Rel. 86, Created)
DT   13-DEC-2005 (Rel. 86, Last updated, Version 1)
XX
DE   Pepino mosaic virus partial TGBp3 gene for triple gene block protein 3 and
DE   CP gene for coat protein, genomic RNA, clone Mu 04.11, isolate 2
XX
KW   coat protein; CP gene; TGBp3 gene; triple gene block protein 3.
XX
OS   Pepino mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-804
RA   Pagan I.;
RT   ;
RL   Submitted (13-JUL-2005) to the EMBL/GenBank/DDBJ databases.
RL   Pagan I., Biotecnologia, E.T.S. Ingenieros Agronomos, Ciudad Universitaria,
RL   Madrid, 28040, SPAIN.
XX
RN   [2]
RA   Pagan I., Cordoba-Selles M., Martinez-Priego L., Fraile A., Malpica J.M.,
RA   Jorda C., Garcia-Arenal F.;
RT   "Genetic structure of the population of Pepino mosaic virus infecting
RT   tomato crops in Spain";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .804
FT                   /country="Spain:Murcia"
FT                   /db_xref="taxon:112229"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Pepino mosaic virus"
FT                   /clone="Mu 04.11"
FT                   /isolate="2"
FT                   /isolation_source="Tomato"
FT   CDS             <1. .50
FT                   /codon_start=3
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /protein_id="CAJ34788.1"
FT                   /translation="PLLPLERVSFPKFEN"
FT   CDS             91. .804
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAJ34789.1"
FT                   /translation="MPDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLRDLKKVKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 804 BP; 226 A; 224 C; 158 G; 196 T; 0 other;

am113841 Length: 804  13-DEC-2005  Type: N  Check: 5769  ..

       1  caccacttct ccccttggaa cgggttagtt ttcctaaatt tgaaaattaa
      51  tattgagttg ttcacaaaat ctaacttcaa taaacaactc atgcctgaca
     101  caacacctgt tgctgccact tcaagtgcac cacccacagc caaagatgct
     151  ggtgccaaag ctccttctga cttctcaaat cccaatacag ctcctagtct
     201  cagagatttg aagaaagtca agtatgtctc caccgtaacc tccgtggcca
     251  caccagctga aattgaagcc ctaggcaaaa tcttcaccgc tatgggcctt
     301  gccgccaatg agactggtcc ggccatgtgg gatctagctc gtgcatatgc
     351  tgatgtgcag agttctaaat cagcacagct gattggagct accccttcca
     401  accctgcact atcacgccga gcccttgctg ctcagtttga tcgaatcaat
     451  ataaccccca ggcaattttg catgtacttt gccaaagttg tttggaacat
     501  acttctcgac agcaacattc caccagcaaa ttgggccaaa cttggttacc
     551  aagaagatac aaaatttgct gcatttgact tcttcgatgg agtcaccaac
     601  cctgccagcc tgcagcctgc tgatggtctt atcaggcagc caaatgagaa
     651  agaactagct gctcactccg tagctaagta cggcgccttg gctaggcaaa
     701  agatctccac aggtaattat attaccacac ttggagaagt cacacgtgga
     751  cacatgggag gagctaacac catgtacgcg atagacgcac cccctgaact
     801  ttaa