Sequence of DPV Potato virus Y

Potato virus Y partial gene for polyprotein, coat protein region, genomic RNA, isolate Henan8

ACC No: AM236810

Dated: 2008-03-18 | Length: 1130 | CRC: 1668970796

                
ID   AM236810; SV 1; linear; genomic RNA; STD; VRL; 1130 BP.
XX
AC   AM236810;
XX
DT   18-MAR-2008 (Rel. 95, Created)
DT   18-MAR-2008 (Rel. 95, Last updated, Version 1)
XX
DE   Potato virus Y partial gene for polyprotein, coat protein region, genomic
DE   RNA, isolate Henan8
XX
KW   coat protein; polyprotein.
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1130
RA   Li X.;
RT   ;
RL   Submitted (18-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL   Li X., Plant Protection, Shandong Agricultural University, NO.61, Daizong
RL   Road, Tai'an City, Shandong Province, 271018, CHINA.
XX
RN   [2]
RA   Tian Y., Liu J., Zhu X., Li X., Valkonen J.P.T.;
RT   "Sequences comparisons of Potato virus Y isolates infecting Chinese
RT   tobacco.";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1130
FT                   /organism="Potato virus Y"
FT                   /specific_host="Nicotiana tabacum"
FT                   /lab_host="Nicotiana tabacum"
FT                   /isolate="Henan8"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Henan"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .804
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="CAJ87137.1"
FT                   /translation="ANDTIDAGGSTKKDAKQEQGSIQQNLNKEKEKDVNVGTSGTHTVP
FT                   RIKAITSKMKMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQLAYDIG
FT                   ETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQSRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
FT   mat_peptide     <1. .801
FT                   /product="coat protein"
FT   3'UTR           805. .1130
XX
SQ   Sequence 1130 BP; 357 A; 198 C; 264 G; 311 T; 0 other;

am236810 Length: 1130  18-MAR-2008  Type: N  Check: 214  ..

       1  gcaaacgata caattgatgc aggaggaagc actaagaagg atgcaaaaca
      51  agagcaaggt agcattcaac aaaatctcaa caaggaaaag gaaaaggacg
     101  taaatgttgg aacatctgga actcatactg tgccacgaat taaagctatc
     151  acgtccaaaa tgaaaatgcc caagagtaaa ggtgcaactg tactaaattt
     201  ggaacactta ctcgagtatg ctccacagca aattgacatc tcaaatactc
     251  gagcaactca atcacagttt gatacgtggt atgaagcagt acaacttgca
     301  tacgacatag gagaaactga aatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaatggaa cctcgccaaa catcaacgga gtttgggtta
     401  tgatggatgg agatgaacaa gtcgaatacc cactgaaacc aatcgttgag
     451  aatgcaaaac caacacttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttagt tcgtaatctg cgcgatggaa gtttggctcg ctatgctttt
     601  gacttttatg aagttacatc acggacacca gtgagggcta gagaggcaca
     651  cattcaaatg aaggccgcag ctttaaaatc agctcaatct cgacttttcg
     701  gattggatgg tggcattagt acacaagagg aaaacacaga aaggcacacc
     751  accgaggatg tttctccaag tatgcatact ctacttggag tgaagaacat
     801  gtgattgtag tgtctttccg gacgatatat agatatttat gtttgcagta
     851  agtattttgg cttttcctgt actactttta tcgaaattaa taatcgtttg
     901  aatattactg gcagataggg gtggtatagc gattccgtcg ttgtagtgac
     951  cttagctgtc gtttctgtat tattatgttt gtataaaagt gccgggttgt
    1001  tgttgttgtg gctgatctat cgattaggtg atgttgcgat ttgtcgtagc
    1051  agtgactatg tctggattta gttacttggg tgatgctgtg attctgtcat
    1101  agcagtgact gtaaacttca atcaggagac