Sequence of DPV Potato virus Y

Potato virus Y partial gene for polyprotein, coat protein region, genomic RNA, isolate Taoxu91

ACC No: AM236814

Dated: 2008-03-18 | Length: 1132 | CRC: -450991642

                
ID   AM236814; SV 1; linear; genomic RNA; STD; VRL; 1132 BP.
XX
AC   AM236814;
XX
DT   18-MAR-2008 (Rel. 95, Created)
DT   18-MAR-2008 (Rel. 95, Last updated, Version 1)
XX
DE   Potato virus Y partial gene for polyprotein, coat protein region, genomic
DE   RNA, isolate Taoxu91
XX
KW   coat protein; polyprotein.
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1132
RA   Li X.;
RT   ;
RL   Submitted (18-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL   Li X., Plant Protection, Shandong Agricultural University, NO.61, Daizong
RL   Road, Tai'an City, Shandong Province, 271018, CHINA.
XX
RN   [2]
RA   Tian Y., Liu J., Zhu X., Li X., Valkonen J.P.T.;
RT   "Sequences comparisons of Potato virus Y isolates infecting Chinese
RT   tobacco.";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1132
FT                   /organism="Potato virus Y"
FT                   /specific_host="Nicotiana tabacum"
FT                   /lab_host="Nicotiana tabacum"
FT                   /isolate="Taoxu91"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Mengyin"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .804
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="CAJ87141.1"
FT                   /translation="GNETIDAGGSTKKDAKQEQGSIQPNLNKEKEKDVNVGTSGTHTVP
FT                   RIKAITSKMRMPKSKGAAVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVQLAYNIG
FT                   ETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGDEQVEYPLKPIVENAKPTLRQIMAHF
FT                   SDVAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARYAFDFYEVTSRTPVRAREAHIQMKA
FT                   AALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
FT   mat_peptide     <1. .801
FT                   /product="coat protein"
FT   3'UTR           805. .1132
XX
SQ   Sequence 1132 BP; 359 A; 210 C; 266 G; 297 T; 0 other;

am236814 Length: 1132  18-MAR-2008  Type: N  Check: 800  ..

       1  ggaaatgaaa caatcgatgc aggaggaagc actaagaagg atgcaaaaca
      51  agagcaaggt agcattcaac caaatctcaa caaggaaaag gaaaaggacg
     101  tgaatgttgg aacatctgga actcatactg tgccacgaat taaagctatc
     151  acgtccaaaa tgagaatgcc caagagtaaa ggtgcagctg tactaaattt
     201  ggaacactta ctcgagtatg ctccacagca aattgatatc tcaaatactc
     251  gagcaactca atcacagttt gatacgtggt atgaagcggt acaacttgca
     301  tacaacatag gagaaaccga aatgccaact gtgatgaatg ggcttatggt
     351  ttggtgcatt gaaaacggaa cctcgccaaa catcaacgga gtttgggtta
     401  tgatggatgg agatgaacaa gtcgaatacc cactgaaacc aatcgttgag
     451  aatgcaaaac caacacttag gcaaatcatg gcacatttct cagatgttgc
     501  agaagcgtat atagaaatgc gcaacaaaaa ggaaccatat atgccacgat
     551  atggtttagt tcgtaatctg cgcgatggaa gtttggctcg ctatgctttt
     601  gacttttatg aggtcacatc acgaacacca gtgagggcta gggaagcgca
     651  cattcaaatg aaggccgcag cattgaaatc agcccaacct cgacttttcg
     701  ggttggacgg tggcatcagt acacaagagg agaacacaga gaggcacacc
     751  accgaggatg tctctccaag tatgcatact ctacttggag tcaagaacat
     801  gtgatgtagt gtctctccgg acgatatata agtatttaca tatgcagtaa
     851  gtattttggc ttttcctgta ctacttttat cataattaat aatcagtttg
     901  aatattacta atagatagag gtggcagggt gatttcgtca ttgtggtgac
     951  tctatctttt aattccgcat tattgaatct tagataaaag tgccgggttg
    1001  tcgttgttgt ggatgattca tcgattaggt gatgttgcga ttctgtcgta
    1051  gcagtgacta tgtctggatc tatctgcttg ggtggtgttg tgatttcgtc
    1101  ataacagtga ctgtaaactt caatcaggag ac