Sequence of DPV Potato virus Y
Potato virus Y partial gene for polyprotein, P1 and helper component-proteinase, HC-Pro region, genomic RNA, isolate Heilongjiang11
ACC No: AM236841
Dated: 2008-03-19 | Length: 1461 | CRC: -498746724
ID AM236841; SV 1; linear; genomic RNA; STD; VRL; 1461 BP.
XX
AC AM236841;
XX
DT 19-MAR-2008 (Rel. 95, Created)
DT 19-MAR-2008 (Rel. 95, Last updated, Version 1)
XX
DE Potato virus Y partial gene for polyprotein, P1 and helper
DE component-proteinase, HC-Pro region, genomic RNA, isolate Heilongjiang11
XX
KW helper component-proteinase, HC-Pro; P1; polyprotein.
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1461
RA Li X.;
RT ;
RL Submitted (19-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Li X., Plant Protection, Shandong Agricultural University, NO.61, Daizong
RL Road, Tai'an City, Shandong Province, 271018, CHINA.
XX
RN [2]
RA Tian Y., Liu J., Zhu X., Li X., Valkonen J.P.T.;
RT "Sequence comparisons of Potato virus Y isolates from tobacco in China.";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1461
FT /organism="Potato virus Y"
FT /specific_host="Nicotiana tabacum"
FT /lab_host="Nicotiana tabacum"
FT /isolate="Heilongjiang11"
FT /mol_type="genomic RNA"
FT /country="China:Heilongjiang"
FT /db_xref="taxon:12216"
FT CDS <1. .>1461
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="CAJ87168.1"
FT /translation="GLFIVRGSHEGKIYDARSRVTQGVMDSMVQFSSAESFWKGLDGNW
FT AQMRYPTDHTCVAGLPVEDCGRVAAIMTHSILPCYKITCPTCAQQYANLPASDLLKILH
FT KHASDGLNRLGADKDRFVHVKKFLTILEHLTEPVDLSLEIFNEVFKSIGEKQQSPFKNL
FT NILNNFFLKGKENTAREWQVAQLSLLELARFQKNRTDNIKKGDISFFRNKLSAKANWNL
FT YLSCDNQLDKNANFLWGQREYHAKRFFSNYFEEIDPAKGYSAYENRLHPNGTRKLAIGN
FT LIVPLDLAEFRRKMKGDYKRQPGVSKKCTSSKDGNYVYPCCCTTLDDGSAVESTFYPPT
FT KKHLVIGNSGDQKYVDLPKGNSEMLYIARQGFCYINIFLAMLINISEEDAKDFTKKVRD
FT MCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHETQTCHVVDSFGSQTTGY
FT HILKASSVSQLILFANDELESDIKHYRVG"
FT mat_peptide <1. .93
FT /product="P1"
FT mat_peptide 94. .1461
FT /product="helper component-proteinase, HC-Pro"
XX
SQ Sequence 1461 BP; 461 A; 266 C; 337 G; 397 T; 0 other;
am236841 Length: 1461 19-MAR-2008 Type: N Check: 2071 ..
1 ggcctattca tagtgcgtgg gtcgcacgaa ggaaaaatct atgatgcacg
51 ttccagggtt actcaagggg ttatggattc aatggttcag ttctcaagcg
101 ctgaaagctt ttggaaggga ttggacggca attgggcaca aatgagatat
151 cctacagatc atacatgtgt ggcaggctta ccagttgaag actgcggcag
201 agttgcagcg ataatgacac acagtatttt accgtgctat aagataacct
251 gccctacctg tgcccaacaa tatgctaact tgccagccag tgacttactt
301 aagatattac acaagcacgc aagtgatggt ttaaatcgat tgggggcaga
351 caaagatcgc tttgtgcatg tcaaaaagtt cttgacaatc ttagagcact
401 taactgaacc ggttgatctg agtttagaaa ttttcaatga agtattcaag
451 tctatagggg agaagcaaca atcacctttc aaaaacctga atattctgaa
501 taatttcttt ttgaaaggaa aggaaaatac agctcgtgaa tggcaggtgg
551 ctcaattaag cttacttgaa ttggcaagat tccaaaagaa cagaacggat
601 aatatcaaga aaggagacat ctcgttcttt aggaataaac tatctgccaa
651 agcaaattgg aacttgtatc tgtcatgtga taaccagctg gataagaatg
701 caaacttcct gtggggacag agggaatatc atgctaagcg atttttctcg
751 aactatttcg aggaaattga tccagcgaag ggctattcag catatgaaaa
801 tcgtttgcat ccgaatggta caagaaaact tgcaattgga aacctaattg
851 taccacttga tctggctgag tttaggcgga agatgaaagg tgattataaa
901 agacaaccag gggtgagtaa gaagtgcacg agctcgaagg atggaaacta
951 cgtgtatccc tgttgttgca ctacacttga tgatggctca gctgttgaat
1001 caacatttta cccgccaact aagaagcacc tcgtaatagg taatagtggc
1051 gaccaaaagt atgttgactt accaaaaggg aattctgaga tgttatatat
1101 tgccaggcaa ggcttctgtt acattaacat tttcctcgcg atgttgatta
1151 acattagtga ggaagatgca aaggatttca ctaagaaggt tcgtgacatg
1201 tgtgtgccaa agcttggaac ctggccaacc atgatggatc tggctacaac
1251 ttgtgctcaa atgaaaatat tctaccctga tgttcatgat gcagaactgc
1301 ctagaatact agtcgatcac gaaacgcaga catgccatgt ggttgactcg
1351 tttggctcac aaacaactgg gtatcatatt ttgaaagcat ctagcgtgtc
1401 ccaacttatt ttgtttgcta atgatgagtt ggagtctgat ataaaacatt
1451 atagagttgg t