Sequence of DPV Potato virus Y
Potato virus Y partial gene for polyprotein, P1 and helper component-proteinase, HC-Pro region, genomic RNA, isolate Zibo3
ACC No: AM236848
Dated: 2008-03-19 | Length: 1461 | CRC: 647954346
ID AM236848; SV 1; linear; genomic RNA; STD; VRL; 1461 BP.
XX
AC AM236848;
XX
DT 19-MAR-2008 (Rel. 95, Created)
DT 19-MAR-2008 (Rel. 95, Last updated, Version 1)
XX
DE Potato virus Y partial gene for polyprotein, P1 and helper
DE component-proteinase, HC-Pro region, genomic RNA, isolate Zibo3
XX
KW helper component-proteinase, HC-Pro; P1; polyprotein.
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1461
RA Li X.;
RT ;
RL Submitted (19-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Li X., Plant Protection, Shandong Agricultural University, NO.61, Daizong
RL Road, Tai'an City, Shandong Province, 271018, CHINA.
XX
RN [2]
RA Tian Y., Liu J., Zhu X., Li X., Valkonen J.P.T.;
RT "Sequence comparisons of Potato virus Y isolates from tobacco in China.";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1461
FT /organism="Potato virus Y"
FT /specific_host="Nicotiana tabacum"
FT /lab_host="Nicotiana tabacum"
FT /isolate="Zibo3"
FT /mol_type="genomic RNA"
FT /country="China:Zibo"
FT /db_xref="taxon:12216"
FT CDS <1. .>1461
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="CAJ87175.1"
FT /translation="GLFIVRGSHEGKIYDARSKVTQGVLDSMVQFSNAESFWKGLDGSW
FT AQMRYPTDHTCVAGLPVEDCGRVAAIITHSILPCYKITCPTCAQQYANLPASDLLKILH
FT RHASDGLSRLGADKDRFVHVSKFLTVLEHLTEPVDLNLEIFNEVFKSIGEKQQSPFKNL
FT NILNNFFLKGKEDTAREWQVAQLSLLELARFQKNRTDNIKKGDISFFRNKLSAKANWNL
FT YLSCDNQLDKNANFLWGQREYHAKRFFSNFFEEIDPAKGYSAYETRLHPNGRRKLAIGN
FT LIVPLDLAEFRRKMKGDYKRQPGVSKKCTSSKDGNYVYPCCCTTLDDGSAVESTFYPPT
FT KKHLVIGNSGDQKYVDLPKGNSEMLYIARQGFCYINIFLAMLINISEEDAKDFTKKVRD
FT MCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHETQTCHVVDSFGSQTTGY
FT HILKASSVSQLILFANDELESDIKHYRVG"
FT mat_peptide <1. .93
FT /product="P1"
FT mat_peptide 94. .1461
FT /product="helper component-proteinase, HC-Pro"
XX
SQ Sequence 1461 BP; 460 A; 280 C; 337 G; 384 T; 0 other;
am236848 Length: 1461 19-MAR-2008 Type: N Check: 4125 ..
1 ggcctattca tagtgcgtgg atcgcacgaa ggaaaaatct atgatgcgcg
51 ttccaaggtt acacaaggag ttctagactc aatggttcag ttctcaaacg
101 ctgaaagctt ctggaaggga ttggacggca gttgggcaca gatgagatac
151 cctacagacc acacatgcgt agcaggctta ccagttgaag actgtggcag
201 agtagcagca ataataacac acagcattct accgtgctat aagataacct
251 gccccacctg tgctcaacag tatgccaact tgccagccag tgatttgctc
301 aaaatattac acaggcacgc aagtgatggt ttaagtcgat tgggagcgga
351 taaagatcgc tttgtgcatg tcagcaagtt cttgacagtc ctagagcact
401 tgactgaacc agttgatcta aatctagaaa tcttcaatga agtattcaag
451 tctataggag agaagcaaca atcacctttc aaaaacctga atattctgaa
501 taatttcttt ttgaaaggaa aggaggatac agctcgtgaa tggcaagtgg
551 ctcaattaag cttacttgaa ttggcaagat tccaaaagaa caggacggat
601 aatatcaaga aaggtgacat ctcgttcttc aggaataagc tatccgccaa
651 agcaaattgg aacttgtatc tgtcatgcga caatcagttg gataagaacg
701 caaacttcct gtggggacag agggaatatc atgccaagcg gtttttctcg
751 aactttttcg aggaaattga tccagcgaag ggctactcag cgtacgaaac
801 tcgtttgcat ccgaatggga gaagaaaact tgcaattgga aacctaattg
851 ttccactcga tctggctgag tttaggcgga agatgaaagg tgattataaa
901 agacagccag gggtgagtaa gaagtgcacg agctcgaagg atggaaacta
951 cgtgtatccc tgttgttgta ctacactcga tgatggctca gctgttgaat
1001 caacatttta cccgccaact aaaaagcatc ttgtaatagg taacagcggt
1051 gatcaaaagt atgttgatct accaaaaggg aattctgaaa tgttatacat
1101 tgccaggcaa gggttttgtt atattaatat attccttgcg atgttgatta
1151 acattagtga ggaagatgca aaggatttca cgaagaaggt tcgtgacatg
1201 tgtgtaccaa agcttggaac ctggccaacc atgatggatc tggctactac
1251 ttgtgctcaa atgaaaatat tctaccctga tgttcatgat gcagagctgc
1301 ccagaatact agttgaccat gaaactcaga catgccatgt ggtcgactcg
1351 tttggttcgc aaacaactgg ttatcatatt ttaaaagcat ctagcgtgtc
1401 tcagctcatc ttatttgcaa atgatgaatt agaatctgat ataaaacatt
1451 atagagttgg t